RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SP9P0CG40 484 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 DNASE1P24855 282 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 HSPA4P34932 840 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PCGF2P35227 344 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 RPL3P39023 403 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 RPS9P46781 194 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 MXI1P50539 228 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 NUDT6P53370 316 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PGGT1BP53609 377 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 TAS2R38P59533 333 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 SEC61BP60468 96 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PTENP60484 403 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CDK3Q00526 305 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 MBTD1Q05BQ5 628 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 RBPJQ06330 500 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 SCN1BQ07699 218 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 LAMTOR4Q0VGL1 99 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 TUBB2AQ13885 445 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 HNF4GQ14541 408 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 MELKQ14680 651 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PTGR1Q14914 329 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 AMZ1Q400G9 498 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 KRTCAP3Q53RY4 240 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 XKR3Q5GH77 459 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 FSCBQ5H9T9 825 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM76BQ5HYJ3 339 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 C6orf136Q5SQH8 315 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 MPP7Q5T2T1 576 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PLA2G4FQ68DD2 849 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 C18orf63Q68DL7 685 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 BRAT1Q6PJG6 821 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CD300LGQ6UXG3 332 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 Q6ZTK2 550 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 MSANTD1Q6ZTZ1 278 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF534Q76KX8 674 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 SNX32Q86XE0 403 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 MFN1Q8IWA4 741 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CHERPQ8IWX8 916 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF595Q8IYB9 648 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PM20D2Q8IYS1 436 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CCAR2Q8N163 923 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 FBXL14Q8N1E6 418 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 FBXO39Q8N4B4 442 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 GCSAMQ8N6F7 178 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 IQCF1Q8N6M8 205 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 EMC1Q8N766 993 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PAPD5Q8NDF8 572 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 BBS10Q8TAM1 723 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 THAP6Q8TBB0 222 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 WDR20Q8TBZ3 569 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ATL1Q8WXF7 558 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 FGF14Q92915 247 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ORAI1Q96D31 301 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ERLEC1Q96DZ1 483 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC51Q96ER9 411 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 MS4A10Q96PG2 267 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 FNBP1Q96RU3 617 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 KXD1Q9BQD3 176 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 MGME1Q9BQP7 344 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 RTP3Q9BQQ7 232 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 LXNQ9BS40 222 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 TUBB2BQ9BVA1 445 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM129AQ9BZQ8 928 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CXCL16Q9H2A7 254 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 NXF3Q9H4D5 531 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 COPS7BQ9H9Q2 264 aaPredicted RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 TBC1D17Q9HA65 648 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PRMT7Q9NVM4 692 aaPredicted RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 VPS54Q9P1Q0 977 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 RCC2Q9P258 522 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 DNAJB9Q9UBS3 223 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ICAM5Q9UMF0 924 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PIN4Q9Y237 131 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 GINS2Q9Y248 185 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CACNA1GO43497 2377 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 STK36Q9NRP7 1315 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CSMD1Q96PZ7 3565 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 PCDH15Q96QU1 1955 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ZFHX3Q15911 3703 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A0B4J293 547 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A1B0GUA9 196 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ARHGEF37A1IGU5 675 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 HTR3EA5X5Y0 456 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 OR6C76A6NM76 312 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 HEPACAM2A8MVW5 462 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 TO15178 435 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ADAM12O43184 909 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 B4GALT5O43286 388 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 RGS14O43566 566 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SPRY3O43610 288 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 STX6O43752 255 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SSX4O60224 188 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ECI2O75521 394 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE7O76087 117 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CXCL14O95715 111 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SYF2O95926 243 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GLUD1P00367 558 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 PENKP01210 267 aaPredicted RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ACAA1P09110 424 aaPredicted RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 OR52Z1P0C646 297 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms