RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 DNAAF1Q8NEP3 725 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 OR10H4Q8NGA5 316 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CASKIN2Q8WXE0 1202 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 FCGR1BQ92637 280 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PHACTR3Q96KR7 559 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CCDC17Q96LX7 622 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PWWP2AQ96N64 755 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 MUS81Q96NY9 551 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 RAB40CQ96S21 281 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CCNL2Q96S94 520 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF559Q9BR84 538 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 HINT2Q9BX68 163 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 AMNQ9BXJ7 453 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SPATC1LQ9H0A9 340 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 OR2AG1Q9H205 316 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PPIL3Q9H2H8 161 aaKnown RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 GOLPH3Q9H4A6 298 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF768Q9H5H4 540 aaKnown RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 COG4Q9H9E3 785 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 JPH1Q9HDC5 661 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 C12orf4Q9NQ89 552 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 KLHL1Q9NR64 748 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SLC22A11Q9NSA0 550 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 MRPS18AQ9NVS2 196 aaKnown RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PARPBPQ9NWS1 579 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 ZNHIT2Q9UHR6 403 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SIX4Q9UIU6 781 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SLC6A14Q9UN76 642 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PSMD13Q9UNM6 376 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 FAF1Q9UNN5 650 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 AP3M1Q9Y2T2 418 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 DYRK1BQ9Y463 629 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SLCO1B1Q9Y6L6 691 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 TOPAZ1Q8N9V7 1692 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 TECPR2O15040 1411 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 TNS3Q68CZ2 1445 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CASKIN1Q8WXD9 1431 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SBF2Q86WG5 1849 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 MN1Q10571 1320 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CDHR2Q9BYE9 1310 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 C17orf100A8MU93 164 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 TERTO14746 1132 aaKnown RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 TRIM24O15164 1050 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CYP27B1O15528 508 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SUV39H1O43463 412 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 DUX1O43812 170 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CUTAO60888 179 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SLC43A1O75387 559 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 NKX2-2O95096 273 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 RAB3DO95716 219 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CTXN2P0C2S0 81 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PNLIPP16233 465 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 S1PR1P21453 382 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 FDXRP22570 491 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PPP2R1AP30153 589 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 IGHMBP2P38935 993 aaKnown RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF135P52742 658 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 MADCAM1Q13477 382 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 ELAVL3Q14576 367 aaKnown RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PRKD1Q15139 912 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 EDRF1Q3B7T1 1238 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 AMZ1Q400G9 498 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CDONQ4KMG0 1287 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SOWAHCQ53LP3 525 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 XKR7Q5GH72 579 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 EPHA10Q5JZY3 1008 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CEP85LQ5SZL2 805 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 MROH9Q5TGP6 573 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SPRYD7Q5W111 196 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 DHRS7BQ6IAN0 325 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 GJB7Q6PEY0 223 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 VSTM1Q6UX27 236 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SYT10Q6XYQ8 523 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PPP1R32Q7Z5V6 425 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 LDB1Q86U70 411 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 FOXP4Q8IVH2 680 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 GCNT2Q8N0V5 402 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 IQCKQ8N0W5 287 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 GTPBP8Q8N3Z3 284 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 CEP112Q8N8E3 955 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 FAM46DQ8NEK8 389 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 REPS2Q8NFH8 660 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 OR13C9Q8NGT0 318 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 PHOSPHO1Q8TCT1 267 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 WIPF2Q8TF74 440 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF480Q8WV37 535 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 HTR3CQ8WXA8 447 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 NPIPB3Q92617 1050 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SCAMP4Q969E2 229 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SLC25A36Q96CQ1 311 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 DUX5Q96PT3 197 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 NPAS1Q99742 590 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SH2D3AQ9BRG2 576 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 LRRC1Q9BTT6 524 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 LHX5Q9H2C1 402 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 DPEP2Q9H4A9 486 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 SGK2Q9HBY8 427 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 GRHL1Q9NZI5 618 aa4.66□□□□□ -1.66
SDCBP-213ENST00000630925 KIAA1456Q9P272 454 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms