RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 LRRC38Q5VT99 294 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 DHRS11Q6UWP2 260 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 FCRLAQ7L513 359 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 NOTCH2NLQ7Z3S9 236 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 LPCAT1Q8NF37 534 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 OR10G8Q8NGN5 311 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 MGARPQ8TDB4 240 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 RNASE8Q8TDE3 154 aaKnown RBP3.59□□□□□ -1.84
CDR1-202ENST00000625883 ZNRF4Q8WWF5 429 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 NXPE2Q96DL1 559 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 LGALS12Q96DT0 336 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 CCDC43Q96MW1 224 aaKnown RBP3.59□□□□□ -1.84
CDR1-202ENST00000625883 P2RY12Q9H244 342 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 CUEDC2Q9H467 287 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 PDRG1Q9NUG6 133 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 TMEM181Q9P2C4 612 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 TRPC4Q9UBN4 977 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 STX8Q9UNK0 236 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 COLEC10Q9Y6Z7 277 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 ARID2Q68CP9 1835 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 A0A087X002 238 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 A0A1W2PR80 420 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 C5orf51A6NDU8 294 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 HHLA1C9JL84 531 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 SAP30O75446 220 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 BAG2O95816 211 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 CEBPBP17676 345 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 RPL35AP18077 110 aaKnown RBP3.58□□□□□ -1.84
CDR1-202ENST00000625883 ELAVL4P26378 380 aaKnown RBP3.58□□□□□ -1.84
CDR1-202ENST00000625883 SERPINH1P50454 418 aaKnown RBP3.58□□□□□ -1.84
CDR1-202ENST00000625883 RPP38P78345 283 aaKnown RBP3.58□□□□□ -1.84
CDR1-202ENST00000625883 AP1B1Q10567 949 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 ABRQ12979 859 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 RPA4Q13156 261 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 CCDC6Q16204 474 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 HFEQ30201 348 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 ARMCX4Q5H9R4 360 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 AGAP6Q5VW22 663 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 KCTD11Q693B1 232 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 Q6ZSR9 355 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 PTAR1Q7Z6K3 402 aaPredicted RBP3.58□□□□□ -1.84
CDR1-202ENST00000625883 ASPGQ86U10 573 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 CNTN4Q8IWV2 1026 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 SMYD1Q8NB12 490 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 SMAP2Q8WU79 429 aaPredicted RBP3.58□□□□□ -1.84
CDR1-202ENST00000625883 DNASE2BQ8WZ79 361 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 SNX21Q969T3 373 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 RFT1Q96AA3 541 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 LRR1Q96L50 414 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 C2orf48Q96LS8 159 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 FAM218AQ96MZ4 157 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 LITAFQ99732 161 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 NKX3-1Q99801 234 aaPredicted RBP3.58□□□□□ -1.84
CDR1-202ENST00000625883 FUCA2Q9BTY2 467 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 IDI2Q9BXS1 227 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 ZNF696Q9H7X3 374 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 RPF1Q9H9Y2 349 aaKnown RBP3.58□□□□□ -1.84
CDR1-202ENST00000625883 DNAJC11Q9NVH1 559 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 FBXW2Q9UKT8 454 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 WDR37Q9Y2I8 494 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 TMED7Q9Y3B3 224 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 ANGPTL3Q9Y5C1 460 aa3.58□□□□□ -1.84
CDR1-202ENST00000625883 MYH14Q7Z406 1995 aaKnown RBP3.57□□□□□ -1.84
CDR1-202ENST00000625883 MAGEB16A2A368 324 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 PRR23AA6NEV1 266 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 A8MVM7 634 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 PRR23D1E9PI22 279 aaPredicted RBP3.57□□□□□ -1.84
CDR1-202ENST00000625883 DDX39AO00148 427 aaKnown RBP3.57□□□□□ -1.84
CDR1-202ENST00000625883 CYTIPO60759 359 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 KERAO60938 352 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 OLFM2O95897 454 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 MT-ND2P03891 347 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 SBK2P0C263 348 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 PRR23D2P0DMB1 279 aaPredicted RBP3.57□□□□□ -1.84
CDR1-202ENST00000625883 SOX3P41225 446 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 GUCY2DQ02846 1103 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 TEFQ10587 303 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 HNRNPDQ14103 355 aaKnown RBP3.57□□□□□ -1.84
CDR1-202ENST00000625883 ADAMTSL4-AS1Q5T5F5 129 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 BHLHB9Q6PI77 547 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 PRSS42Q7Z5A4 293 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 LSMEM2Q8N112 164 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 ST7LQ8TDW4 575 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 ATP6V0BQ99437 205 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 ACAT2Q9BWD1 397 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 TDRD1Q9BXT4 1180 aaKnown RBP3.57□□□□□ -1.84
CDR1-202ENST00000625883 NACAP1Q9BZK3 213 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 VPS33BQ9H267 617 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 DPEP2Q9H4A9 486 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 EXOC1Q9NV70 894 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 INTS10Q9NVR2 710 aaKnown RBP3.57□□□□□ -1.84
CDR1-202ENST00000625883 TMOD3Q9NYL9 352 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 HACD3Q9P035 362 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 GAB2Q9UQC2 676 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 ITM2BQ9Y287 266 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 SPATA31D1Q6ZQQ2 1576 aa3.57□□□□□ -1.84
CDR1-202ENST00000625883 A0A087WZ39 114 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 FAM149AA5PLN7 773 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 GLTPD2A6NH11 291 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 SLCO1B7G3V0H7 640 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms