RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 CATSPEREQ5SY80 951 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 AGAP7PQ5VUJ5 663 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 METTL2BQ6P1Q9 378 aaKnown RBP11.78□□□□□ -0.52
LINC00963-217ENST00000624009 SLCO4C1Q6ZQN7 724 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 ISCA2Q86U28 154 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 KRT78Q8N1N4 520 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 NOA1Q8NC60 698 aaKnown RBP11.78□□□□□ -0.52
LINC00963-217ENST00000624009 OR9A4Q8NGU2 314 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 UBTD2Q8WUN7 234 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 AGAP4Q96P64 663 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 SLC6A16Q9GZN6 736 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 CLMPQ9H6B4 373 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 NUDT4Q9NZJ9 180 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 C19orf25Q9UFG5 118 aaPredicted RBP11.78□□□□□ -0.52
LINC00963-217ENST00000624009 PTBP2Q9UKA9 531 aaKnown RBP11.78□□□□□ -0.52
LINC00963-217ENST00000624009 ACOT9Q9Y305 439 aa11.78□□□□□ -0.52
LINC00963-217ENST00000624009 NDUFS4O43181 175 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-217ENST00000624009 H2AFYO75367 372 aaKnown RBP11.77□□□□□ -0.53
LINC00963-217ENST00000624009 WDR47O94967 919 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 HEXBP07686 556 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 C1GALT1C1LP0DN25 315 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 COX6A1P12074 109 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ALOX12P18054 663 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ITGA3P26006 1051 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 CNTFP26441 200 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ECHS1P30084 290 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 CASP2P42575 452 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 AGTR2P50052 363 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 FOXL2P58012 376 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 MEF2AQ02078 507 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-217ENST00000624009 SLMAPQ14BN4 828 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 FAM83EQ2M2I3 478 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 JMJD6Q6NYC1 403 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-217ENST00000624009 TMIGD1Q6UXZ0 262 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 RAPH1Q70E73 1250 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 LRRC70Q7Z2Q7 622 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 LAPTM4BQ86VI4 370 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ZADH2Q8N4Q0 377 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 RBMXL3Q8N7X1 1067 aaKnown RBP11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ANKRD53Q8N9V6 530 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 KCT2Q8NC54 265 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ZNF740Q8NDX6 193 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 OR51Q1Q8NH59 317 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 PPP4R1Q8TF05 950 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 METTL21AQ8WXB1 218 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ISL2Q96A47 359 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 MIB2Q96AX9 1013 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 LMF1Q96S06 567 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 TUBB6Q9BUF5 446 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 EFCAB11Q9BUY7 163 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ZNF700Q9H0M5 742 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 DNAJC11Q9NVH1 559 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 WWOXQ9NZC7 414 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 NINJ2Q9NZG7 142 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 ZNF180Q9UJW8 692 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 MKL2Q9ULH7 1088 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 RNF112Q9ULX5 631 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 B3GNT3Q9Y2A9 372 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 MRPS2Q9Y399 296 aaKnown RBP11.77□□□□□ -0.53
LINC00963-217ENST00000624009 MAST4O15021 2626 aa11.77□□□□□ -0.53
LINC00963-217ENST00000624009 CENPEQ02224 2701 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 IGHV1-45A0A0A0MS14 117 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 NSG1A0A0A6YYJ2 146 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 HMX2A2RU54 273 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 A6NL46 340 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 CDK2AP1O14519 115 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 CLGNO14967 610 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 TAPBPO15533 448 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 ALOX12BO75342 701 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 CLEC3AO75596 197 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 KLHL18O94889 574 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 S100BP04271 92 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-217ENST00000624009 SERPINA7P05543 415 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 C8orf89P0DMQ9 161 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 SMIM10L1P0DMW3 83 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 IL1RNP18510 177 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 JAK1P23458 1154 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 XCR1P46094 333 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 SERPINB8P50452 374 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 SERPINB9P50453 376 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 STXBP1P61764 594 aaKnown RBP11.76□□□□□ -0.53
LINC00963-217ENST00000624009 LAPTM5Q13571 262 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 ACAP2Q15057 778 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 OR4D1Q15615 310 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 PDK4Q16654 411 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 ADPRMQ3LIE5 342 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 PAGE2BQ5JRK9 111 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 SHISA6Q6ZSJ9 500 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 TAOK1Q7L7X3 1001 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 TMPRSS11BQ86T26 416 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 PDSS2Q86YH6 399 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 KBTBD2Q8IY47 623 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 EIF1ADQ8N9N8 165 aaKnown RBP11.76□□□□□ -0.53
LINC00963-217ENST00000624009 CREB3L4Q8TEY5 395 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 SLC44A1Q8WWI5 657 aa11.76□□□□□ -0.53
LINC00963-217ENST00000624009 PTCD3Q96EY7 689 aaKnown RBP11.76□□□□□ -0.53
LINC00963-217ENST00000624009 SMIM10Q96HG1 83 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms