RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PWP1Q13610 501 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 GPR19Q15760 415 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 TUBB8Q3ZCM7 444 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 TCTE1Q5JU00 501 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 BMPERQ8N8U9 685 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 CAMKVQ8NCB2 501 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 TWIST2Q8WVJ9 160 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 SLC13A3Q8WWT9 602 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 N4BP2L2Q92802 583 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 ZNF501Q96CX3 271 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 ZNF317Q96PQ6 595 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 FANCEQ9HB96 536 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 DMRT3Q9NQL9 472 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 FARSBQ9NSD9 589 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 OCIAD1Q9NX40 245 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 FIS1Q9Y3D6 152 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 SPTBP11277 2137 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 B4E171 279 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 SLCO1B7G3V0H7 640 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 H3BMH7 237 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 TXNDC9O14530 226 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 DXOO77932 396 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 TBX6O95947 436 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 PDYNP01213 254 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 SERPINA6P08185 405 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 SLC35G6P0C7Q6 338 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 HSD3B1P14060 373 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 HSD3B2P26439 372 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 ETV5P41161 510 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 TSPAN7P41732 249 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 CYP4F2P78329 520 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 MC2RQ01718 297 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 TUBB3Q13509 450 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 DDX39BQ13838 428 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 ABRAXAS2Q15018 415 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 MANEAQ5SRI9 462 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 CYB5D1Q6P9G0 228 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 IGF2-ASQ6U949 168 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 TRIM46Q7Z4K8 759 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 BPHLQ86WA6 291 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 CSNK1A1LQ8N752 337 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 GBP7Q8N8V2 638 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 KDF1Q8NAX2 398 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 OR8K5Q8NH50 307 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 NT5CQ8TCD5 201 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 MTERF1Q99551 399 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 CCT7Q99832 543 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 MS4A8Q9BY19 250 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 TUBB1Q9H4B7 451 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 BRF2Q9HAW0 419 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 ASCL3Q9NQ33 180 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 CELSR3Q9NYQ7 3312 aa18.91■□□□□ 0.62
PDLIM2-221ENST00000622702 EFCAB7A8K855 629 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 MAGEB17A8MXT2 336 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 TMEM150CB9EJG8 249 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 P2RX6O15547 441 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 NDUFS4O43181 175 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 VIMP08670 466 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 LSP1P33241 339 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 CSTF3Q12996 717 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 PRTGQ2VWP7 1150 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 SGO1Q5FBB7 561 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 WASHC2DQ5SRD0 308 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 ZNF655Q8N720 491 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 OR1L3Q8NH93 324 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 MTFMTQ96DP5 389 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 CMTM7Q96FZ5 175 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 ZNF578Q96N58 590 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 OR6C1Q96RD1 312 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 SLC6A16Q9GZN6 736 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 FBXO8Q9NRD0 319 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 VTI1BQ9UEU0 232 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 MARCOQ9UEW3 520 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 SERTAD3Q9UJW9 196 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 FITM1A5D6W6 292 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 HDAC3O15379 428 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 ZSCAN9O15535 394 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 CTSBP07858 339 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 PTX3P26022 381 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 ITGA1P56199 1179 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 RPS13P62277 151 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 GNGT1P63211 74 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 RGS1Q08116 209 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 HYAL2Q12891 473 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 IL11RAQ14626 422 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 ADPRMQ3LIE5 342 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 TBC1D25Q3MII6 688 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 RNF175Q8N4F7 328 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 HBEGFQ99075 208 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 NLNQ9BYT8 704 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 PFDN4Q9NQP4 134 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 THSD1Q9NS62 852 aa18.9■□□□□ 0.62
PDLIM2-221ENST00000622702 LRIT2A6NDA9 550 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 CDRT15L2A8MXV6 281 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 PIP5K1BO14986 540 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 OR2B3O76000 313 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 TGDSO95455 350 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 EIF2S1P05198 315 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 SERPIND1P05546 499 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 KITP10721 976 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms