RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SLC29A1Q99808 456 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 PRR14Q9BWN1 585 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 RPF2Q9H7B2 306 aaKnown RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 MMP17Q9ULZ9 603 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 AP4S1Q9Y587 144 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 TECTAO75443 2155 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 FAM227AF5H4B4 570 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 ARPC2O15144 300 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 E2F6O75461 281 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 ENGP17813 658 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 JAK1P23458 1154 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 CERS1P27544 350 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 ACADLP28330 430 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 SLC6A12P48065 614 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 MAPK12P53778 367 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 EMX2Q04743 252 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 MAPRE2Q15555 327 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 XKR7Q5GH72 579 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 FAM69BQ5VUD6 431 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 C18orf63Q68DL7 685 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 FAAH2Q6GMR7 532 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 CHSY3Q70JA7 882 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 GALNT5Q7Z7M9 940 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 NRSN1Q8IZ57 195 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 ZNF614Q8N883 585 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 SLC37A2Q8TED4 501 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 CYGBQ8WWM9 190 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 PIGKQ92643 395 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 KAT2AQ92830 837 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 QRSL1Q9H0R6 528 aaKnown RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 GID8Q9NWU2 228 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 ADGRE2Q9UHX3 823 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 LEF1Q9UJU2 399 aaPredicted RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 PCDHGA11Q9Y5H2 935 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 ANHXE9PGG2 379 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 KCNH1O95259 989 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 ETFAP13804 333 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 KELP23276 732 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 AKT2P31751 481 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 CHI3L1P36222 383 aaPredicted RBP10.09□□□□□ -0.79
VPS11-208ENST00000621676 TNFRSF4P43489 277 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 INHBCP55103 352 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 CLDN6P56747 220 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 DCDC1P59894 354 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 PRSS53Q2L4Q9 553 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 COX20Q5RI15 118 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 CPTPQ5TA50 214 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 NXPE4Q6UWF7 544 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 OR2T12Q8NG77 320 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 OR5D16Q8NGK9 328 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 OR4A15Q8NGL6 344 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 XAGE5Q8WWM1 108 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 RAB7BQ96AH8 199 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 SIKE1Q9BRV8 207 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 GTPBP2Q9BX10 602 aaKnown RBP10.09□□□□□ -0.79
VPS11-208ENST00000621676 SOHLH2Q9NX45 425 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 OBP2AQ9NY56 170 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.09□□□□□ -0.79
VPS11-208ENST00000621676 A0A1B0GVT2 93 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 CCDC160A6NGH7 325 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 CHURC1-FNTBB4DL54 471 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 SLC28A1O00337 649 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 TRIM38O00635 465 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 PGRMC2O15173 223 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 VEGFDO43915 354 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 LDB3O75112 727 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 JRKO75564 520 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 IGHV4-34P06331 123 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 CBSLP0DN79 551 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 FUT4P22083 530 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 CBSP35520 551 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 FNTBP49356 437 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 HNMTP50135 292 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 VSX2P58304 361 aaPredicted RBP10.09□□□□□ -0.79
VPS11-208ENST00000621676 VAC14Q08AM6 782 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 CYP2A13Q16696 494 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 UGT8Q16880 541 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 SYT16Q17RD7 645 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 XKR5Q6UX68 686 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 NET1Q7Z628 596 aaPredicted RBP10.09□□□□□ -0.79
VPS11-208ENST00000621676 NLRP8Q86W28 1048 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 AMIGO1Q86WK6 493 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 FAM47BQ8NA70 645 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 RCBTB1Q8NDN9 531 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 OR5K2Q8NHB8 316 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 ATL1Q8WXF7 558 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 FBXL8Q96CD0 374 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 TGM7Q96PF1 710 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 VPS35Q96QK1 796 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 NTMT1Q9BV86 223 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 SPATA6Q9NWH7 488 aaPredicted RBP10.09□□□□□ -0.79
VPS11-208ENST00000621676 EHD3Q9NZN3 535 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 C15orf41Q9Y2V0 281 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 A8MUA0 341 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 ZW10O43264 779 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 GDF9O60383 454 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 PRKD3O94806 890 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 AP2A2O94973 939 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 SRFP11831 508 aa10.09□□□□□ -0.79
VPS11-208ENST00000621676 MAT1AQ00266 395 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms