RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ZNF705FA8MVS1 300 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 HHLA1C9JL84 531 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ITM2AO43736 263 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 AP2A1O95782 977 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF705DP0CH99 300 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF705BP0CI00 300 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CXCL8P10145 99 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ENDOUP21128 410 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CAMLGP49069 296 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ART1P52961 327 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MOGSQ13724 837 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 VASH1Q7L8A9 365 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 TMCO2Q7Z6W1 182 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PXKQ7Z7A4 578 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 RELL1Q8IUW5 271 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 DUSP9Q99956 384 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MECRQ9BV79 373 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 FAIMQ9NVQ4 179 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PPP4R1LQ9P1A2 415 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 KIF25Q9UIL4 384 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ASF1AQ9Y294 204 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PLEKHM1Q9Y4G2 1056 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 YDJCA8MPS7 323 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 FAM86B1E9PN63 330 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PLATP00750 562 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 DPP6P42658 865 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 WASP42768 502 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 TOB1P50616 345 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ATP4BP51164 291 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ACTA2P62736 377 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ACTG2P63267 376 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 RPP30P78346 268 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 RBPJQ06330 500 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 NOMO1Q15155 1222 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 NTRK3Q16288 839 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MSANTD2Q6P1R3 559 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PNCKQ6P2M8 343 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 FAM86B1Q8N7N1 296 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SLC7A13Q8TCU3 470 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 STK35Q8TDR2 534 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 LRFN1Q9P244 771 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 NPEPPSL1A6NEC2 478 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 KRBOX1C9JBD0 128 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 LATO43561 262 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MATN4O95460 622 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 AOC1P19801 751 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MRPS10P82664 201 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PFKPQ01813 784 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 TSTQ16762 297 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ACSBG2Q5FVE4 666 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF425Q6IV72 752 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 DNAJC22Q8N4W6 341 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ATP6V1C2Q8NEY4 427 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 TSSK3Q96PN8 268 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MTMR9Q96QG7 549 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CYP2S1Q96SQ9 504 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 HNRNPABQ99729 332 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SPIN2AQ99865 258 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SPIN2BQ9BPZ2 258 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 GON7Q9BXV9 100 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CEP41Q9BYV8 373 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 BCAS3Q9H6U6 928 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 RIOX1Q9H6W3 641 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CAMTA1Q9Y6Y1 1673 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 NRCAMQ92823 1304 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 A8MVJ9 347 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 TREHO43280 583 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 ESR1P03372 595 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 DRD2P14416 443 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 MPIP34949 423 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 RPS14P62263 151 aaKnown RBP6.96□□□□□ -1.29
COLCA1-205ENST00000620864 MC1RQ01726 317 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 RHDQ02161 417 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 NAE1Q13564 534 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 TGFBIQ15582 683 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 GPR153Q6NV75 609 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 P4HA3Q7Z4N8 544 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 RAVER1Q8IY67 606 aaKnown RBP6.96□□□□□ -1.29
COLCA1-205ENST00000620864 COX18Q8N8Q8 333 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 OR56B2PQ8NGI1 322 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 LPPQ93052 612 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM203Q969S6 136 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 FKBP10Q96AY3 582 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 RADILQ96JH8 1075 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 MGAT4CQ9UBM8 478 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 ATG4BQ9Y4P1 393 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 CBY3A6NI87 242 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 CPSF4LA6NMK7 179 aaKnown RBP6.96□□□□□ -1.29
COLCA1-205ENST00000620864 SOBPA7XYQ1 873 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 PITPNBP48739 271 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 SEC13P55735 322 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 ST3GAL3Q11203 375 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 CAPSQ13938 189 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 GAS6Q14393 721 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 LASP1Q14847 261 aaKnown RBP6.96□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF674Q2M3X9 581 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 SLC25A52Q3SY17 297 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 TEX44Q53QW1 395 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 PRAMEF13Q5VWM6 474 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms