RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 HRH4Q9H3N8 390 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 RC3H2Q9HBD1 1191 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SRRDQ9UH36 339 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ANXA2P2A6NMY6 339 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SNNO75324 88 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ENTPD6O75354 484 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ANXA2P07355 339 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 PITPNAQ00169 270 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 VWA5B2Q8N398 1253 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 HDDC3Q8N4P3 179 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 COL21A1Q96P44 957 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CDT1Q9H211 546 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 hCG_1807616A0A1W2PRN6 198 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 OTCP00480 354 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 MBP02144 154 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 RNF224P0DH78 156 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 LMO2P25791 158 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 OR1E1P30953 314 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 LEPRP48357 1165 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 AIMP2Q13155 320 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 GLT8D1Q68CQ7 371 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 OR4K2Q8NGD2 314 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 TSEN15Q8WW01 171 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 HERVK_113Q902F9 699 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 AHCYL2Q96HN2 611 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ADGRE3Q9BY15 652 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 GNG8Q9UK08 70 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ZFR2Q9UPR6 939 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 B3GNT3Q9Y2A9 372 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 FFAR2O15552 330 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 GRID2O43424 1007 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CYTIPO60759 359 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IFNA10P01566 189 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IFNA4P05014 189 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SPARCP09486 303 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 FGRP09769 529 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CBSLP0DN79 551 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NR2F6P10588 404 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CBSP35520 551 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ALDH3B2P48448 385 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 RENBPP51606 427 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 C1QTNF8P60827 252 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF705AQ6ZN79 300 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 STK35Q8TDR2 534 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SGK2Q9HBY8 427 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 KLHL22Q53GT1 634 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 RNF130Q86XS8 419 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 KLBQ86Z14 1044 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CCDC71Q8IV32 467 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF419Q96HQ0 510 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SORT1Q99523 831 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CTRCQ99895 268 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IPPKQ9H8X2 491 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 KLRG2A4D1S0 409 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 A8MT66 165 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF705FA8MVS1 300 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CD63P08962 238 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF705DP0CH99 300 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF705BP0CI00 300 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CRHBPP24387 322 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 GNPDA1P46926 289 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SRP9P49458 86 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PEA15Q15121 130 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NKPD1Q17RQ9 610 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 BMT2Q1RMZ1 405 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 UNQ6126/PRO20091Q6UXV3 157 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 HSDL2Q6YN16 418 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 DTWD1Q8N5C7 304 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PQLC3Q8N755 202 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 RELL2Q8NC24 303 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 AKR7LQ8NHP1 331 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 EXOSC8Q96B26 276 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 TTPALQ9BTX7 342 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ABCG4Q9H172 646 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZDHHC7Q9NXF8 308 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 B4GALT5O43286 388 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 C4BPAP04003 597 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 FXYD6P3P58550 94 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ANKRD53Q8N9V6 530 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 C1orf216Q8TAB5 229 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF778Q96MU6 729 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 DPEP3Q9H4B8 488 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 C1orf109Q9NX04 203 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 GPR52Q9Y2T5 361 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NOP16Q9Y3C1 178 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 TPSB2P20231 275 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 HUNKP57058 714 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IRF5Q13568 498 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 TPSAB1Q15661 275 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ACBD4Q8NC06 268 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IFT27Q9BW83 186 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IL20RAQ9UHF4 553 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CLEC2DQ9UHP7 191 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF639Q9UID6 485 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 DYRK1BQ9Y463 629 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF541Q9H0D2 1346 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NEO1Q92859 1461 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 OR6C75A6NL08 312 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 MTA2O94776 668 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 TCEAL5Q5H9L2 206 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms