RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FITM1A5D6W6 292 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 UGDHO60701 494 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 DNAJB6O75190 326 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 PDYNP01213 254 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 FOXL2P58012 376 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 ABCE1P61221 599 aaKnown RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 RPS13P62277 151 aaKnown RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 GPS2Q13227 327 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 RTP5Q14D33 572 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 GGTA1PQ4G0N0 100 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 PAGE2BQ5JRK9 111 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 CEACAM20Q6UY09 585 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 TTLL10Q6ZVT0 673 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 ZNF781Q8N8C0 355 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 ZNF75CPQ92670 426 aaPredicted RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 F2RL3Q96RI0 385 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 ULBP3Q9BZM4 244 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 SPRY4Q9C004 299 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 NT5DC2Q9H857 520 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 FANCEQ9HB96 536 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 TRPS1Q9UHF7 1281 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 HYKKA2RU49 373 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 JUNP05412 331 aaKnown RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 IL1RNP18510 177 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 CXCR2P25025 360 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 SLC1A6P48664 564 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 GYS2P54840 703 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 PKNOX1P55347 436 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 RAB8AP61006 207 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 STX3Q13277 289 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 LAPTM5Q13571 262 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 SLC9A5Q14940 896 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 ABRAXAS2Q15018 415 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 HIST2H2ACQ16777 129 aaPredicted RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.98□□□□□ -0.33
NEK3-210ENST00000620675 FRG2Q64ET8 278 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 TTC19Q6DKK2 380 aaPredicted RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 HIST2H2AA3Q6FI13 130 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 FAM199XQ6PEV8 388 aaPredicted RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 PDSS2Q86YH6 399 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 GPR135Q8IZ08 494 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 GALNT6Q8NCL4 622 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 FRG2BQ96QU4 278 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 DDA1Q9BW61 102 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 SORBS1Q9BX66 1292 aaKnown RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 SLC6A16Q9GZN6 736 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 TUBB1Q9H4B7 451 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 ACTR5Q9H9F9 607 aaPredicted RBP12.98□□□□□ -0.33
NEK3-210ENST00000620675 SLCO1B3Q9NPD5 702 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 PCDHGA3Q9Y5H0 932 aa12.98□□□□□ -0.33
NEK3-210ENST00000620675 LRIT2A6NDA9 550 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 ZNF860A6NHJ4 632 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 ANKDD1BA6NHY2 528 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 RTCAO00442 366 aaKnown RBP12.97□□□□□ -0.33
NEK3-210ENST00000620675 MANBAO00462 879 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 FOXS1O43638 330 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 SNNO75324 88 aaPredicted RBP12.97□□□□□ -0.33
NEK3-210ENST00000620675 STK17BO94768 372 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 ZNF888P0CJ79 500 aaPredicted RBP12.97□□□□□ -0.33
NEK3-210ENST00000620675 RAB15P59190 212 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 ASPHQ12797 758 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 TOR1AIP1Q5JTV8 583 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 TCTE1Q5JU00 501 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 SH2D4BQ5SQS7 431 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 TMEM214Q6NUQ4 689 aaKnown RBP12.97□□□□□ -0.33
NEK3-210ENST00000620675 UBE3DQ7Z6J8 389 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 AMER3Q8N944 861 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 MS4A8Q9BY19 250 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 CUTCQ9NTM9 273 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 PNPOQ9NVS9 261 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 PCDHGA11Q9Y5H2 935 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 MAU2Q9Y6X3 613 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 PTPRQQ9UMZ3 2332 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 NVLO15381 856 aaKnown RBP12.97□□□□□ -0.33
NEK3-210ENST00000620675 HSPA4LO95757 839 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 ALAS2P22557 587 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 RBMS1P29558 406 aaKnown RBP12.97□□□□□ -0.33
NEK3-210ENST00000620675 HMOX2P30519 316 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 OR1D4P47884 311 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 GUCY1A3Q02108 690 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 TGIF1Q15583 401 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 UGT3A2Q3SY77 523 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 FAM69BQ5VUD6 431 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 OR9A4Q8NGU2 314 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 NT5CQ8TCD5 201 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 UTP15Q8TED0 518 aaKnown RBP12.97□□□□□ -0.33
NEK3-210ENST00000620675 SELENOMQ8WWX9 145 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 MS4A6EQ96DS6 147 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 THAP11Q96EK4 314 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 TRMOQ9BU70 441 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
NEK3-210ENST00000620675 SLC22A11Q9NSA0 550 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 NDOR1Q9UHB4 597 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 TRAF6Q9Y4K3 522 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 DNAJC15Q9Y5T4 150 aa12.97□□□□□ -0.33
NEK3-210ENST00000620675 A0A0A6YYC8 382 aaPredicted RBP12.96□□□□□ -0.33
NEK3-210ENST00000620675 I3L1I5 382 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms