RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 MUC3AQ02505 3323 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 A0A0B4J293 547 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 TCRBV3S1A0A5B6 114 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 SMAD6O43541 496 aaKnown RBP14.83□□□□□ -0.04
NOP56-220ENST00000616692 RECKO95980 971 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 CD46P15529 392 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 PAICSP22234 425 aaKnown RBP14.83□□□□□ -0.04
NOP56-220ENST00000616692 MBTD1Q05BQ5 628 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 ATP6AP1Q15904 470 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 LRRC66Q68CR7 880 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 NPSR1Q6W5P4 371 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 NUP54Q7Z3B4 507 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 RBM23Q86U06 439 aaKnown RBP14.83□□□□□ -0.04
NOP56-220ENST00000616692 PAQR7Q86WK9 346 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 TGIF2LXQ8IUE1 241 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 TMEM40Q8WWA1 233 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 MTERF3Q96E29 417 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 YIPF6Q96EC8 236 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 RNF31Q96EP0 1072 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 CCNL2Q96S94 520 aaPredicted RBP14.83□□□□□ -0.04
NOP56-220ENST00000616692 DPH7Q9BTV6 452 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 TBCDQ9BTW9 1192 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 MRPL37Q9BZE1 423 aaKnown RBP14.83□□□□□ -0.04
NOP56-220ENST00000616692 GSX2Q9BZM3 304 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 DDX31Q9H8H2 851 aaKnown RBP14.83□□□□□ -0.04
NOP56-220ENST00000616692 ZNF334Q9HCZ1 680 aaPredicted RBP14.83□□□□□ -0.04
NOP56-220ENST00000616692 C6orf50Q9HD87 102 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 SMPD3Q9NY59 655 aaPredicted RBP14.83□□□□□ -0.04
NOP56-220ENST00000616692 PPIL1Q9Y3C6 166 aa14.83□□□□□ -0.04
NOP56-220ENST00000616692 RFPL4AA6NLU0 287 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 RFPL4AL1F8VTS6 287 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 LYPLA2O95372 231 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 HTR1AP08908 422 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 SAGP10523 405 aaPredicted RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 TPH1P17752 444 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 SFNP31947 248 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 SPRP35270 261 aaPredicted RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 GMPRP36959 345 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 IDH3AP50213 366 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 POU4F1Q01851 419 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 PTRHD1Q6GMV3 140 aaKnown RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 SCIMPQ6UWF3 145 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 REC114Q7Z4M0 266 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 TRIM48Q8IWZ4 208 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 CELF6Q96J87 481 aaKnown RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 TRIM9Q9C026 710 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 OPA3Q9H6K4 179 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 ASCL3Q9NQ33 180 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 ANKEF1Q9NU02 776 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 PPP4R1LQ9P1A2 415 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 ALG5Q9Y673 324 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 A0A0U1RQF3 1178 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 M0QYV0 167 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 MRPS14O60783 128 aaKnown RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 SOX30O94993 753 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 CD6P30203 668 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 RORAP35398 523 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 LIPAP38571 399 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 ETV6P41212 452 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 NBL1P41271 181 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 ARHGAP19Q14CB8 494 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 FNDC3BQ53EP0 1204 aaKnown RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 IER5LQ5T953 404 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 SLC25A24Q6NUK1 477 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 PAPD4Q6PIY7 484 aaKnown RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 OGFOD3Q6PK18 319 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 PAMR1Q6UXH9 720 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 VWA5B2Q8N398 1253 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 STPG2Q8N412 459 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 SORCS2Q96PQ0 1159 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 SDHCQ99643 169 aaPredicted RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 ZNF577Q9BSK1 485 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 ING2Q9H160 280 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 CLEC4MQ9H2X3 399 aaPredicted RBP14.82□□□□□ -0.04
NOP56-220ENST00000616692 WDR41Q9HAD4 459 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 MED9Q9NWA0 146 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 SARDHQ9UL12 918 aa14.82□□□□□ -0.04
NOP56-220ENST00000616692 CRATP43155 626 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 BCAR1P56945 870 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 ORC2Q13416 577 aaPredicted RBP14.81□□□□□ -0.04
NOP56-220ENST00000616692 ILKQ13418 452 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 RBMS2Q15434 407 aaKnown RBP14.81□□□□□ -0.04
NOP56-220ENST00000616692 IL17AQ16552 155 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 VITQ6UXI7 678 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 C1orf122Q6ZSJ8 110 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 RDH10Q8IZV5 341 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 CMTR1Q8N1G2 835 aaKnown RBP14.81□□□□□ -0.04
NOP56-220ENST00000616692 MEIOBQ8N635 442 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 PLA2G15Q8NCC3 412 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 KIAA0895Q8NCT3 520 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 OR56B2PQ8NGI1 322 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 OR6X1Q8NH79 312 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 SERAC1Q96JX3 654 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 NSMCE2Q96MF7 247 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 GHRLQ9UBU3 117 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 V9GY48 417 aaPredicted RBP14.81□□□□□ -0.04
NOP56-220ENST00000616692 TMEM191CA6NGB0 347 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 PHYHO14832 338 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 OGTO15294 1046 aa14.81□□□□□ -0.04
NOP56-220ENST00000616692 HNMTP50135 292 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms