RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TRIP11Q15643 1979 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 A0A1W2PRQ8 180 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 SAP18O00422 153 aaKnown RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 DLGAP1O14490 977 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 TNFRSF10BO14763 440 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ERI3O43414 337 aaKnown RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 DLX3O60479 287 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 INMTO95050 263 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 BCHEP06276 602 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ELNP15502 786 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 S100A2P29034 98 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 WDR4P57081 412 aaKnown RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 KCNC4Q03721 635 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ARHGAP1Q07960 439 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 DSC3Q14574 896 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 CHRNA6Q15825 494 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 NADK2Q4G0N4 442 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 PITRM1Q5JRX3 1037 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 PAQR7Q86WK9 346 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 RIOK2Q9BVS4 552 aaKnown RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 XPNPEP1Q9NQW7 623 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 MS4A12Q9NXJ0 267 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 PLCL2Q9UPR0 1127 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 FAM170BA6NMN3 283 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 C9JVG2 144 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 XRCC1P18887 633 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 LCN1P31025 176 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 MS4A13Q5J8X5 152 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 TOR1AIP1Q5JTV8 583 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ZSWIM9Q86XI8 627 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 TSTD1Q8NFU3 115 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 OR2AP1Q8NGE2 309 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 SCAMP5Q8TAC9 235 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 CD99L2Q8TCZ2 262 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 RANBP3Q9H6Z4 567 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 TMEM184CQ9NVA4 438 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ABCD2Q9UBJ2 740 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 KLHL21Q9UJP4 597 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 SCP2D1Q9UJQ7 156 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ABCG2Q9UNQ0 655 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 HCN4Q9Y3Q4 1203 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 PCDHGA3Q9Y5H0 932 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ISPDA4D126 451 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 RP2O75695 350 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 PFKMP08237 780 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 GSTT2P0CG29 244 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 CDH11P55287 796 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 EVX2Q03828 476 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 FADDQ13158 208 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 SYT16Q17RD7 645 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 CLEC12AQ5QGZ9 265 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 FBXL22Q6P050 247 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 HACD2Q6Y1H2 254 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 DCDC5Q6ZRR9 648 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ZBTB46Q86UZ6 589 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ZNF565Q8N9K5 539 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 FAM156AQ8NDB6 213 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 OR9A1PQ8NGU1 263 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 RHEBL1Q8TAI7 183 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ALPK1Q96QP1 1244 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 TM9SF2Q99805 663 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 TOR3AQ9H497 397 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 LAMP5Q9UJQ1 280 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 NUP50Q9UKX7 468 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ZNF536O15090 1300 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 KLRG2A4D1S0 409 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 GLTPD2A6NH11 291 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 WTIPA6NIX2 430 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 SLITRK5O94991 958 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ANXA3P12429 323 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 RHEBQ15382 184 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 GPR68Q15743 365 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 PRSS55Q6UWB4 352 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 MFSD2AQ8NA29 543 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 SHKBP1Q8TBC3 707 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 PCDHAC1Q9H158 963 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 MMP27Q9H306 513 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 GRHPRQ9UBQ7 328 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 PPM1HQ9ULR3 514 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 YIPF1Q9Y548 306 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 VSTM5A8MXK1 200 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 BHMG1C9JSJ3 638 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 PLGP00747 810 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 AP2S1P53680 142 aaPredicted RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 ACTA2P62736 377 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 ACTG2P63267 376 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 MC1RQ01726 317 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 RHDQ02161 417 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 SH3D19Q5HYK7 790 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 C22orf39Q6P5X5 142 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 TPRG1Q6ZUI0 275 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 C1orf52Q8N6N3 182 aaKnown RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 DCAF4L2Q8NA75 395 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 SMG8Q8ND04 991 aaKnown RBP4.43□□□□□ -1.7
CHD9-221ENST00000615216 ELP5Q8TE02 316 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 BIRC7Q96CA5 298 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 DMRTB1Q96MA1 342 aa4.43□□□□□ -1.7
CHD9-221ENST00000615216 BIRC8Q96P09 236 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms