RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 CYTH2Q99418 400 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 DRC3Q9H069 523 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF160Q9HCG1 818 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 KLHL42Q9P2K6 505 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ANKMY1Q9P2S6 941 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 RNF11Q9Y3C5 154 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 KLK4Q9Y5K2 254 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 EXOC1LA0A1B0GW35 172 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 A8MUA0 341 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ESPNB1AK53 854 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 B4GALT2O60909 372 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 SEC24DO94855 1032 aaPredicted RBP5.39□□□□□ -1.55
CPNE3-208ENST00000614678 BMP10O95393 424 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ANXA5P08758 320 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 SLC26A3P40879 764 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 XCR1P46094 333 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 UCNP55089 124 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 RUNX2Q13950 521 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ZC3H12BQ5HYM0 836 aaKnown RBP5.39□□□□□ -1.55
CPNE3-208ENST00000614678 DCAF10Q5QP82 559 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 TLDC1Q6P9B6 456 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 LCTLQ6UWM7 567 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CLNKQ7Z7G1 428 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 NKAPQ8N5F7 415 aaKnown RBP5.39□□□□□ -1.55
CPNE3-208ENST00000614678 TEX9Q8N6V9 391 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CEP112Q8N8E3 955 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 SNX31Q8N9S9 440 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 OR51Q1Q8NH59 317 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 UBLCP1Q8WVY7 318 aaPredicted RBP5.39□□□□□ -1.55
CPNE3-208ENST00000614678 APOBEC4Q8WW27 367 aaKnown RBP5.39□□□□□ -1.55
CPNE3-208ENST00000614678 RAB11FIP5Q9BXF6 653 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 B3GNT4Q9C0J1 378 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 VN1R1Q9GZP7 353 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 SLC25A18Q9H1K4 315 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 OR51B5Q9H339 312 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 C3orf18Q9UK00 162 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 EMCNQ9ULC0 261 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ACOT9Q9Y305 439 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 C21orf140B9A014 251 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 LTA4HP09960 611 aaKnown RBP5.39□□□□□ -1.55
CPNE3-208ENST00000614678 RNF224P0DH78 156 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CERS1P27544 350 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CAV1Q03135 178 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CHIT1Q13231 466 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ESPL1Q14674 2120 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 XKR6Q5GH73 641 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 TECRLQ5HYJ1 363 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 SCIMPQ6UWF3 145 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 LINC00696Q6ZRV3 163 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CYS1Q717R9 158 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ASPGQ86U10 573 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 OR4N5Q8IXE1 308 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 C4orf33Q8N1A6 199 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF321PQ8N8H1 164 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 Q8NA96 180 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ZSCAN1Q8NBB4 408 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 MNS1Q8NEH6 495 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 OR8K5Q8NH50 307 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 UTP15Q8TED0 518 aaKnown RBP5.39□□□□□ -1.55
CPNE3-208ENST00000614678 KCNA7Q96RP8 456 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 C17orf62Q9BQA9 187 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 DHRS4Q9BTZ2 278 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CRB3Q9BUF7 120 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF552Q9H707 407 aaPredicted RBP5.39□□□□□ -1.55
CPNE3-208ENST00000614678 TMEM184CQ9NVA4 438 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CLDN16Q9Y5I7 305 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 PTGDR2Q9Y5Y4 395 aa5.39□□□□□ -1.55
CPNE3-208ENST00000614678 CROCCQ5TZA2 2017 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 VSTM2BA6NLU5 285 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 OR7A17O14581 309 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 PYGBP11216 843 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 PLA2G2AP14555 144 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 EZRP15311 586 aaKnown RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CHN1P15882 459 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 FOLR3P41439 243 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SCTRP47872 440 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 RHDQ02161 417 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SP140Q13342 867 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 MAP7Q14244 749 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CPSF6Q16630 551 aaKnown RBP eCLIP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SYVN1Q86TM6 617 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CARFQ8N187 725 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 FAM47BQ8NA70 645 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 NUDT8Q8WV74 236 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 RERGQ96A58 199 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 NPAS2Q99743 824 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SYTL2Q9HCH5 934 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SEMA4BQ9NPR2 832 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 MTRF1LQ9UGC7 380 aaKnown RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 POLHQ9Y253 713 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 AP1M2Q9Y6Q5 423 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 GLOD5A6NK44 160 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 F8W8V4 182 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 E2F3O00716 465 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SLC16A5O15375 505 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SRPX2O60687 465 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 STK16O75716 305 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 WFS1O76024 890 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 INHBAP08476 426 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 AGXTP21549 392 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms