RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 NANOGP8Q6NSW7 305 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 BLOC1S3Q6QNY0 202 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNPH-203ENST00000614659 GPRIN1Q7Z2K8 1008 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 FAM129CQ86XR2 697 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 FAM3CQ92520 227 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 WDR92Q96MX6 357 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 RSPH9Q9H1X1 276 aaPredicted RBP14.26□□□□□ -0.13
SNPH-203ENST00000614659 NANOGQ9H9S0 305 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 CKLFQ9UBR5 152 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 SEC14L4Q9UDX3 406 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 CARD8Q9Y2G2 431 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 ZNF840PA6NDX5 716 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 H3BSA7 217 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 PABPC4LP0CB38 370 aaKnown RBP14.26□□□□□ -0.13
SNPH-203ENST00000614659 TFPIP10646 304 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 C5AR1P21730 350 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 CDK6Q00534 326 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 PIGGQ5H8A4 983 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 PGBD2Q6P3X8 592 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 CEP97Q8IW35 865 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 OR56A1Q8NGH5 318 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 HSH2DQ96JZ2 352 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 PCDHGA2Q9Y5H1 932 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 NRAPQ86VF7 1730 aa14.26□□□□□ -0.13
SNPH-203ENST00000614659 CCKBRP32239 447 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 NCBP2P52298 156 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNPH-203ENST00000614659 RBBP4Q09028 425 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 TARDBPQ13148 414 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNPH-203ENST00000614659 KLHL36Q8N4N3 616 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 SLC5A11Q8WWX8 675 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 BIRC8Q96P09 236 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 TPT1P8Q9HAU6 139 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 RNF11Q9Y3C5 154 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 PCP4L1A6NKN8 68 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 G3V2L1 256 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 EDIL3O43854 480 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 RIPPLY1Q0D2K3 151 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 SPANXN4Q5MJ08 99 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 AGTRAPQ6RW13 159 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 CHRDL2Q6WN34 429 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 PJA1Q8NG27 643 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 KLHL6Q8WZ60 621 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 PTPN18Q99952 460 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 FBXW2Q9UKT8 454 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 CA14Q9ULX7 337 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 SCN7AQ01118 1682 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 DHCR24Q15392 516 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 PTCHD3Q3KNS1 767 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 OLFML2AQ68BL7 652 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 FAM171BQ6P995 826 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 MNTQ99583 582 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 UCK2Q9BZX2 261 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 ADAMTS6Q9UKP5 1117 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 CYP8B1Q9UNU6 501 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 PRKCGP05129 697 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 RABL3Q5HYI8 236 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 SYVN1Q86TM6 617 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 NXPE3Q969Y0 559 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 KCNA7Q96RP8 456 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 DSN1Q9H410 356 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 ABCB9Q9NP78 766 aa14.25□□□□□ -0.13
SNPH-203ENST00000614659 PRAMEF12O95522 483 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 GPRC6AQ5T6X5 926 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 TRAM1L1Q8N609 369 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 NCSTNQ92542 709 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 TOR3AQ9H497 397 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 TRBC2A0A5B9 178 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 MMP20O60882 483 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 CLPXO76031 633 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 F7P08709 466 aaPredicted RBP14.24□□□□□ -0.13
SNPH-203ENST00000614659 SHMT2P34897 504 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 SLC13A2Q13183 592 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 CDKL4Q5MAI5 379 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 OR4C6Q8NH72 309 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 LRRC20Q8TCA0 184 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 LRRC46Q96FV0 321 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 C1QTNF1Q9BXJ1 281 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 IRF2BPLQ9H1B7 796 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 C14orf105Q9NVL8 296 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 AKAP11Q9UKA4 1901 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 ORC5O43913 435 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 SMSP52788 366 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
SNPH-203ENST00000614659 OR10T2Q8NGX3 314 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 ITFG2Q969R8 447 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 C12orf43Q96C57 262 aaKnown RBP14.24□□□□□ -0.13
SNPH-203ENST00000614659 IGSF5Q9NSI5 407 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 TVP23BQ9NYZ1 205 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 MGAT4BQ9UQ53 548 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 TMX2-CTNND1H3BSU7 103 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 ACOX3O15254 700 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 CTSOP43234 321 aaPredicted RBP14.24□□□□□ -0.13
SNPH-203ENST00000614659 EGFL6Q8IUX8 553 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 DCUN1D3Q8IWE4 304 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 C2orf73Q8N5S3 287 aaPredicted RBP14.24□□□□□ -0.13
SNPH-203ENST00000614659 OR9A1PQ8NGU1 263 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 OR2M4Q96R27 311 aa14.24□□□□□ -0.13
SNPH-203ENST00000614659 XKRYO14609 159 aa14.23□□□□□ -0.13
SNPH-203ENST00000614659 RPS3P23396 243 aaKnown RBP eCLIP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms