RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PRLHRP49683 370 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 STK19P49842 368 aaPredicted RBP10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SRSF11Q05519 484 aaKnown RBP10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PLPP4Q5VZY2 271 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 BTN2A2Q8WVV5 523 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ARMC5Q96C12 935 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZNF486Q96H40 463 aaPredicted RBP10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 HIST1H2AHQ96KK5 128 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 LINC00615Q96LM1 132 aaPredicted RBP10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 Q96MT0 163 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 HIST1H2AJQ99878 128 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 H2AFJQ9BTM1 129 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 WDR12Q9GZL7 423 aaKnown RBP10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FAM83DQ9H4H8 585 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ACTR8Q9H981 624 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PAQR5Q9NXK6 330 aaPredicted RBP10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ARL15Q9NXU5 204 aa10.48□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ELOVL7A1L3X0 281 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SLC1A7O00341 560 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 BCKDKO14874 412 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 HOXC11O43248 304 aaPredicted RBP10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PRPS1L1P21108 318 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CD40LGP29965 261 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GRSF1Q12849 480 aaKnown RBP eCLIP10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 IL18R1Q13478 541 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZNF805Q5CZA5 627 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 STEAP3Q658P3 488 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GRHL2Q6ISB3 625 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 NEK5Q6P3R8 708 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CACTIN-AS1Q8N1I8 211 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CADM2Q8N3J6 435 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 OR56A3Q8NH54 315 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CXorf40BQ96DE9 158 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 IRF2BPLQ9H1B7 796 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 EHD3Q9NZN3 535 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CSF2RAP15509 400 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 S100A5P33763 92 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 HNF4AP41235 474 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 HMGCS1Q01581 520 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 LRRC26Q2I0M4 334 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FAM174BQ3ZCQ3 159 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TMEM215Q68D42 235 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PHOSPHO2Q8TCD6 241 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TMEM246Q9BRR3 403 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DCSTAMPQ9H295 470 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FARSBQ9NSD9 589 aaKnown RBP10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CCL26Q9Y258 94 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PRKAB1Q9Y478 270 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 LOC100130705A0A1B0GUX0 176 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 EFCAB9A8MZ26 197 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PER2O15055 1255 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SCN2BO60939 215 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SEC22BO75396 215 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 RFPL2O75678 378 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DNAJB5O75953 348 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SEC14L2O76054 403 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CPNE6O95741 557 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TYRP14679 529 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GDF5P43026 501 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ST13P50502 369 aaKnown RBP10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PPP2R2BQ00005 443 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CD83Q01151 205 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 MXD1Q05195 221 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GPR153Q6NV75 609 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SLC16A12Q6ZSM3 486 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TMEM179BQ7Z7N9 219 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SLC47A1Q96FL8 570 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PIKFYVEQ9Y2I7 2098 aa10.47□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 KRT87PA6NCN2 255 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 NPC1O15118 1278 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CCDC159P0C7I6 412 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 POU2F1P14859 743 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 C21orf33P30042 268 aaPredicted RBP10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 MMP12P39900 470 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 RAB25P57735 213 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 IFITM2Q01629 132 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 NKG7Q16617 165 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 RBM48Q5RL73 367 aaKnown RBP10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FRG2Q64ET8 278 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TMEM132CQ8N3T6 1108 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TMIEQ8NEW7 156 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 OR52J3Q8NH60 311 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 UTP15Q8TED0 518 aaKnown RBP10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SKA2Q8WVK7 121 aaPredicted RBP10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 LGALS12Q96DT0 336 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TPD52L3Q96J77 140 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 COQ10AQ96MF6 247 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FRG2BQ96QU4 278 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 P2RY13Q9BPV8 354 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZDHHC6Q9H6R6 413 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FAM120CQ9NX05 1096 aaKnown RBP10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 IL36AQ9UHA7 158 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GMPPBQ9Y5P6 360 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 A8MX80 341 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CPNE3O75131 537 aaKnown RBP10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 VIPP01282 170 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 BMP1P13497 986 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GPX2P18283 190 aa10.46□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GRK3P35626 688 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms