RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 MFSD1Q9H3U5 465 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 LDAHQ9H6V9 325 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 C12orf49Q9H741 205 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 TM9SF3Q9HD45 589 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 MRPS30Q9NP92 439 aaKnown RBP6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 C19orf12Q9NSK7 152 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 NUDT15Q9NV35 164 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 MPP6Q9NZW5 540 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC2A6Q9UGQ3 507 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 PCDHGB4Q9UN71 923 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 GABRQQ9UN88 632 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 MAGED2Q9UNF1 606 aaPredicted RBP6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 LIPT1Q9Y234 373 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 RNF11Q9Y3C5 154 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 HSPE1-MOB4S4R3N1 261 aa6.48□□□□□ -1.37
CDKAL1-204ENST00000613575 CROCCQ5TZA2 2017 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 DOCK3Q8IZD9 2030 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TRIP12Q14669 1992 aaPredicted RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 A0A0C4DFX4 3053 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 E2F8A0AVK6 867 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 CCDC182A6NF36 153 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TRABD2BA6NFA1 517 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 OR6C75A6NL08 312 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 ZNF729A6NN14 1252 aaPredicted RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 NDUFS8O00217 210 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SMAD6O43541 496 aaKnown RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 DFNA5O60443 496 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 B4GALT3O60512 393 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PLOD3O60568 738 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PMPCBO75439 489 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TIPRLO75663 272 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 RAB3DO95716 219 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 OPN1MWP04001 364 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 FGF4P08620 206 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 QDPRP09417 244 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 FBP1P09467 338 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 OPN1MW2P0DN77 364 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 OPN1MW3P0DN78 364 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SAGP10523 405 aaPredicted RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 IFI30P13284 250 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 JUPP14923 745 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 CAPN3P20807 821 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PTAFRP25105 342 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 GRK3P35626 688 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC1A2P43004 574 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SUOXP51687 545 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 MPP1Q00013 466 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 DEFA6Q01524 100 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 DSC2Q02487 901 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 RGS1Q08116 209 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC10A7Q0GE19 358 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 GRIK2Q13002 908 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PUM1Q14671 1186 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TRAM2Q15035 370 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PSMD5Q16401 504 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 CARTPTQ16568 116 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 DGUOKQ16854 277 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 FAM83EQ2M2I3 478 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PARP15Q460N3 678 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC39A12Q504Y0 691 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TMEM31Q5JXX7 168 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 CLLU1OSQ5K130 101 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 HECTD3Q5T447 861 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 INTS11Q5TA45 600 aaKnown RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 IL31Q6EBC2 164 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PTRHD1Q6GMV3 140 aaKnown RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 FBXL22Q6P050 247 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TTC33Q6PID6 262 aaPredicted RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 C16orf89Q6UX73 402 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TFAP2EQ6VUC0 442 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 RTL4Q6ZR62 310 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SSX9Q7RTT3 188 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 DEFB107AQ8IZN7 70 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 NAGSQ8N159 534 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PELI3Q8N2H9 469 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 ZNF619Q8N2I2 560 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 MFSD4AQ8N468 514 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 POC5Q8NA72 575 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 IL17RCQ8NAC3 791 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 KYQ8NBH2 561 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TP53I13Q8NBR0 393 aaPredicted RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC24A4Q8NFF2 622 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 OR13J1Q8NGT2 312 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 HUS1BQ8NHY5 278 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 ZNF566Q969W8 418 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC25A36Q96CQ1 311 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TSPAN17Q96FV3 270 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 ST6GAL2Q96JF0 529 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 ZNF597Q96LX8 424 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 PPP3R2Q96LZ3 170 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 ZNF599Q96NL3 588 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 QRFPRQ96P65 431 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 SSX3Q99909 188 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 TCEAL7Q9BRU2 100 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 BDH2Q9BUT1 245 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 CLEC4MQ9H2X3 399 aaPredicted RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 WDR55Q9H6Y2 383 aaPredicted RBP6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 GAREM1Q9H706 876 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 NIPAL2Q9H841 368 aa6.47□□□□□ -1.37
CDKAL1-204ENST00000613575 ZBTB26Q9HCK0 441 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms