RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CSMD2Q7Z408 3487 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 ZNF860A6NHJ4 632 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 MAGEB17A8MXT2 336 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 DNALI1O14645 258 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-215ENST00000612337 BANF1O75531 89 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 CDC123O75794 336 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-215ENST00000612337 PRF1P14222 555 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 TNFRSF8P28908 595 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 AP1S2P56377 157 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 IL2P60568 153 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 RBPJQ06330 500 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 ABRAXAS2Q15018 415 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 MSS51Q4VC12 460 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 MTFR2Q6P444 385 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 PAPD4Q6PIY7 484 aaKnown RBP16.73■□□□□ 0.27
SSBP1-215ENST00000612337 STRA8Q7Z7C7 330 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 CRLF3Q8IUI8 442 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 ZNF740Q8NDX6 193 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 MDS2Q8NDY4 140 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 PYCR2Q96C36 320 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 CERS2Q96G23 380 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 SNF8Q96H20 258 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 CCDC120Q96HB5 630 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 LPAR4Q99677 370 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 NPAS2Q99743 824 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 UTP23Q9BRU9 249 aaKnown RBP16.73■□□□□ 0.27
SSBP1-215ENST00000612337 ARL15Q9NXU5 204 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 ASIC3Q9UHC3 531 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 FBN2P35556 2912 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 DCHS2Q6V1P9 2916 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 OTOGQ6ZRI0 2925 aa16.73■□□□□ 0.27
SSBP1-215ENST00000612337 TACC2O95359 2948 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 TRBC2A0A5B9 178 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 PABPN1LA6NDY0 278 aaKnown RBP16.72■□□□□ 0.27
SSBP1-215ENST00000612337 CCL21O00585 134 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 CES2O00748 559 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 TTI1O43156 1089 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 NDUFS4O43181 175 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 OR1F1O43749 312 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 GALR3O60755 368 aaPredicted RBP16.72■□□□□ 0.27
SSBP1-215ENST00000612337 FHP07954 510 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 ALOX12P18054 663 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 SKP1P63208 163 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 ACTN3Q08043 901 aaPredicted RBP16.72■□□□□ 0.27
SSBP1-215ENST00000612337 PDAP1Q13442 181 aaKnown RBP16.72■□□□□ 0.27
SSBP1-215ENST00000612337 PWP1Q13610 501 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 USP10Q14694 798 aaKnown RBP16.72■□□□□ 0.27
SSBP1-215ENST00000612337 TEDDM1Q5T9Z0 273 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 NIPAL1Q6NVV3 410 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 RPTNQ6XPR3 784 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 SRRM1Q8IYB3 904 aaKnown RBP16.72■□□□□ 0.27
SSBP1-215ENST00000612337 TBC1D19Q8N5T2 526 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 SLC5A8Q8N695 610 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 OR5T3Q8NGG3 340 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 ATL1Q8WXF7 558 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 TSLPQ969D9 159 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 FBXL8Q96CD0 374 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 MOCOSQ96EN8 888 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 SCMH1Q96GD3 660 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 SIGLEC12Q96PQ1 595 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 OR4K3Q96R72 315 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 RBCK1Q9BYM8 510 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 TRIM54Q9BYV2 358 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 RUBCNLQ9H714 662 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 AKAP9Q99996 3911 aa16.72■□□□□ 0.27
SSBP1-215ENST00000612337 CD96P40200 585 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 OR4D2P58180 307 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 MEF2AQ02078 507 aaPredicted RBP16.71■□□□□ 0.27
SSBP1-215ENST00000612337 OR1C1Q15619 314 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 HECTD2Q5U5R9 776 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 MRGPRGQ86SM5 289 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 IGDCC3Q8IVU1 814 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 LGI4Q8N135 537 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 SLC35F6Q8N357 371 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 ZNF808Q8N4W9 903 aaPredicted RBP16.71■□□□□ 0.27
SSBP1-215ENST00000612337 SLC5A11Q8WWX8 675 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 SLCO2A1Q92959 643 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 TBC1D20Q96BZ9 403 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 UNKQ9C0B0 810 aaKnown RBP16.71■□□□□ 0.27
SSBP1-215ENST00000612337 PLAC1Q9HBJ0 212 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 PPANQ9NQ55 473 aaKnown RBP16.71■□□□□ 0.27
SSBP1-215ENST00000612337 SLC17A6Q9P2U8 582 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 CORO1CQ9ULV4 474 aaPredicted RBP16.71■□□□□ 0.27
SSBP1-215ENST00000612337 VWA7Q9Y334 891 aa16.71■□□□□ 0.27
SSBP1-215ENST00000612337 ADGRG4Q8IZF6 3080 aa16.71■□□□□ 0.26
SSBP1-215ENST00000612337 PKDREJQ9NTG1 2253 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 ASPDHA6ND91 283 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 GABRR3A8MPY1 467 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 CDK2AP1O14519 115 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 MAN1A2O60476 641 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 SLC19A2O60779 497 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 WISP2O76076 250 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 MLYCDO95822 493 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 ENO2P09104 434 aaPredicted RBP16.7■□□□□ 0.26
SSBP1-215ENST00000612337 CD46P15529 392 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 JAK1P23458 1154 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 CASP6P55212 293 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 SLC26A5P58743 744 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 TAS2R50P59544 299 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 RGS1Q08116 209 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms