RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 FAHD1Q6P587 224 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 SYTL1Q8IYJ3 562 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 C11orf65Q8NCR3 313 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 SPPL2AQ8TCT8 520 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 COQ8BQ96D53 544 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 SH3YL1Q96HL8 342 aaPredicted RBP16.58■□□□□ 0.25
NEK3-206ENST00000611833 C7orf34Q96L11 122 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 ZNF347Q96SE7 839 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 EPYCQ99645 322 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 BCL7BQ9BQE9 202 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 RHNO1Q9BSD3 238 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 CHST8Q9H2A9 424 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 CCNB1IP1Q9NPC3 277 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 SIRT5Q9NXA8 310 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 TBC1D14Q9P2M4 693 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 ZNF282Q9UDV7 671 aaPredicted RBP16.58■□□□□ 0.25
NEK3-206ENST00000611833 SLC22A1O15245 554 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 RRM2P31350 389 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 PCGF2P35227 344 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 MMP12P39900 470 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 CAMK2GQ13555 558 aaPredicted RBP16.58■□□□□ 0.24
NEK3-206ENST00000611833 CLCA4Q14CN2 919 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 TEAD4Q15561 434 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 RGS21Q2M5E4 152 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 ERAP2Q6P179 960 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 LIPIQ6XZB0 460 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 CAMKMTQ7Z624 323 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 P2RY8Q86VZ1 359 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 KLHDC8AQ8IYD2 350 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 UBE2FQ969M7 185 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 REPS1Q96D71 796 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 DOHHQ9BU89 302 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 RAPGEFL1Q9UHV5 662 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 PCDHGB3Q9Y5G1 929 aa16.58■□□□□ 0.24
NEK3-206ENST00000611833 CLDN25C9JDP6 229 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 CASP9P55211 416 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 PCDH1Q08174 1060 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 ZNF846Q147U1 533 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 PROX2Q3B8N5 592 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 SLCO4C1Q6ZQN7 724 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 IGFN1Q86VF2 1251 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 GULP1Q9UBP9 304 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 ERGIC3Q9Y282 383 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 B3GNT3Q9Y2A9 372 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 COQ6Q9Y2Z9 468 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 IRAK3Q9Y616 596 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 RNASET2O00584 256 aaKnown RBP16.57■□□□□ 0.24
NEK3-206ENST00000611833 TOR1BO14657 336 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 DPM1O60762 260 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 ALDH4A1P30038 563 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 KRT20P35900 424 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 MASP1P48740 699 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 CRYBA2P53672 197 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 LRRC74AQ0VAA2 488 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 IQCCQ4KMZ1 466 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 SYT6Q5T7P8 510 aaPredicted RBP16.57■□□□□ 0.24
NEK3-206ENST00000611833 PARS2Q7L3T8 475 aaKnown RBP16.57■□□□□ 0.24
NEK3-206ENST00000611833 OR4K1Q8NGD4 311 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 NDNFQ8TB73 568 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 CHPT1Q8WUD6 406 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 YIPF6Q96EC8 236 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 WRAP53Q9BUR4 548 aaKnown RBP16.57■□□□□ 0.24
NEK3-206ENST00000611833 HMG20AQ9NP66 347 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 NECTIN3Q9NQS3 549 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 DYRK1BQ9Y463 629 aa16.57■□□□□ 0.24
NEK3-206ENST00000611833 C1orf105O95561 183 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 GBAP04062 536 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 RXRGP48443 463 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 VBP1P61758 197 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 TBPL1P62380 186 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 MVKQ03426 396 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 ADPRMQ3LIE5 342 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 CATSPEREQ5SY80 951 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 AHSA2Q719I0 299 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 CCDC71Q8IV32 467 aaPredicted RBP16.56■□□□□ 0.24
NEK3-206ENST00000611833 CFAP206Q8IYR0 622 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 MRPL43Q8N983 215 aaKnown RBP16.56■□□□□ 0.24
NEK3-206ENST00000611833 ZNF480Q8WV37 535 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 SAMD11Q96NU1 681 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 BHLHE41Q9C0J9 482 aaPredicted RBP16.56■□□□□ 0.24
NEK3-206ENST00000611833 REEP4Q9H6H4 257 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 ACOT13Q9NPJ3 140 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 SAGE1Q9NXZ1 904 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 MARK1Q9P0L2 795 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 DKK3Q9UBP4 350 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 PADI2Q9Y2J8 665 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 TESMINQ9Y4I5 508 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 TNFRSF11BO00300 401 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 SAP18O00422 153 aaKnown RBP16.56■□□□□ 0.24
NEK3-206ENST00000611833 PCDHGA12O60330 932 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 SULT1C4O75897 302 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 FGF19O95750 216 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 ACVR2AP27037 513 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 GSSP48637 474 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 METAP1P53582 386 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 PNLIPRP1P54315 467 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 SELENOWP63302 87 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 HTRA4P83105 476 aaPredicted RBP16.56■□□□□ 0.24
NEK3-206ENST00000611833 ZNF763Q0D2J5 394 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms