RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LHCGRP22888 699 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 GRK3P35626 688 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 KCNJ10P78508 379 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 IFITM2Q01629 132 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 C17orf99Q6UX52 265 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 OLIG3Q7RTU3 272 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 NRARPQ7Z6K4 114 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 DEFB128Q7Z7B8 93 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 NRTNQ99748 197 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 MMP28Q9H239 520 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 KCTD5Q9NXV2 234 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 DNAJC27Q9NZQ0 273 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 UGT2A1Q9Y4X1 527 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 SEPT4O43236 478 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 FZD6O60353 706 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 MED26O95402 600 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 ACVR2AP27037 513 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 DOC2AQ14183 400 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 TMC5Q6UXY8 1006 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 PSD2Q9BQI7 771 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 SORBS1Q9BX66 1292 aaKnown RBP19.66■□□□□ 0.74
SSBP3-216ENST00000610401 DNAJC11Q9NVH1 559 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 NDUFAF4Q9P032 175 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 CLEC2DQ9UHP7 191 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 PCDHGB6Q9Y5F9 930 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 PCDHGB1Q9Y5G3 927 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 KRT75O95678 551 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 CASP3P42574 277 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 DBPQ10586 325 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-216ENST00000610401 CBLL1Q75N03 491 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 CMTM8Q8IZV2 173 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 ZNF566Q969W8 418 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 VPS35Q96QK1 796 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 BRD9Q9H8M2 597 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 PLSCR3Q9NRY6 295 aa19.66■□□□□ 0.74
SSBP3-216ENST00000610401 KMOO15229 486 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 C6orf47O95873 294 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 ZDHHC11BP0C7U3 371 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 NSG1P42857 185 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 TMPRSS11BQ86T26 416 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 TAGAPQ8N103 731 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 DNAJC22Q8N4W6 341 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 CMTM7Q96FZ5 175 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 OR51B5Q9H339 312 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 CCNB1IP1Q9NPC3 277 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 C5AR2Q9P296 337 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 MALT1Q9UDY8 824 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 IFT52Q9Y366 437 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 VWA8A3KMH1 1905 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 CLCA1A8K7I4 914 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 TAF4O00268 1085 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 GALTP07902 379 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 PRPS1L1P21108 318 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 PTNP21246 168 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 CSNK1DP48730 415 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 RGS6P49758 472 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 STARD3Q14849 445 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 ZC3H12BQ5HYM0 836 aaKnown RBP19.65■□□□□ 0.74
SSBP3-216ENST00000610401 PAQR6Q6TCH4 344 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 PLPP6Q8IY26 295 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 GPR65Q8IYL9 337 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 SLC34A3Q8N130 599 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 C7orf34Q96L11 122 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 PSORS1C1Q9UIG5 152 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 LYVE1Q9Y5Y7 322 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 CKAP5Q14008 2032 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 OR2B6P58173 313 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 UBE3AQ05086 875 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 RPS26P11Q5JNZ5 115 aaPredicted RBP19.65■□□□□ 0.74
SSBP3-216ENST00000610401 PTCHD4Q6ZW05 846 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 TRNT1Q96Q11 434 aaKnown RBP19.65■□□□□ 0.74
SSBP3-216ENST00000610401 HTATIP2Q9BUP3 242 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 MMP27Q9H306 513 aa19.65■□□□□ 0.74
SSBP3-216ENST00000610401 H3BN98 237 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 IDH3BO43837 385 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 EOMESO95936 686 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 HMGA1P17096 107 aaKnown RBP19.64■□□□□ 0.73
SSBP3-216ENST00000610401 HBA1P69905 142 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 RGNQ15493 299 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 USP43Q70EL4 1123 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 SERPINA11Q86U17 422 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 TRIM48Q8IWZ4 208 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 ZNF486Q96H40 463 aaPredicted RBP19.64■□□□□ 0.73
SSBP3-216ENST00000610401 SMAD5Q99717 465 aaKnown RBP19.64■□□□□ 0.73
SSBP3-216ENST00000610401 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.64■□□□□ 0.734e-6■■■□□ 16.4
SSBP3-216ENST00000610401 ZNF556Q9HAH1 456 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 ABCB9Q9NP78 766 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 ZNF226Q9NYT6 803 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 APOA1P02647 267 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 CHI3L1P36222 383 aaPredicted RBP19.64■□□□□ 0.73
SSBP3-216ENST00000610401 RPS13P62277 151 aaKnown RBP19.64■□□□□ 0.73
SSBP3-216ENST00000610401 PTSQ03393 145 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 ZNF385BQ569K4 471 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 C10orf62Q5T681 223 aaPredicted RBP19.64■□□□□ 0.73
SSBP3-216ENST00000610401 Q6ZVL8 140 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 TSEN54Q7Z6J9 526 aaKnown RBP19.64■□□□□ 0.73
SSBP3-216ENST00000610401 AQP11Q8NBQ7 271 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 FBLIM1Q8WUP2 373 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 SORCS1Q8WY21 1168 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 MYDGFQ969H8 173 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms