RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 RAB11FIP5Q9BXF6 653 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 RBM38Q9H0Z9 239 aaKnown RBP11.48□□□□□ -0.57
USP6NL-206ENST00000609853 TM9SF3Q9HD45 589 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 DDX18Q9NVP1 670 aaKnown RBP11.48□□□□□ -0.57
USP6NL-206ENST00000609853 PTTG2Q9NZH5 202 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 SH3BP4Q9P0V3 963 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 SLC23A2Q9UGH3 650 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 BAG5Q9UL15 447 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 BTBD3Q9Y2F9 522 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 ORC6Q9Y5N6 252 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 ANKDD1BA6NHY2 528 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 GPR37L1O60883 481 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 E2F6O75461 281 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 TGFB1P01137 390 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 FURINP09958 794 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 PCGF2P35227 344 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 DCTP40126 519 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 MAGEA10P43363 369 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-206ENST00000609853 CCR8P51685 355 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 RAD23AP54725 363 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 ROR2Q01974 943 aaKnown RBP11.47□□□□□ -0.57
USP6NL-206ENST00000609853 RBBP4Q09028 425 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 HYAL1Q12794 435 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 FADDQ13158 208 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 IL18R1Q13478 541 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 RGNQ15493 299 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 FAM71E1Q6IPT2 247 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 ADNP2Q6IQ32 1131 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 SHQ1Q6PI26 577 aaKnown RBP11.47□□□□□ -0.57
USP6NL-206ENST00000609853 PAGE2Q7Z2X7 111 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 ZNF551Q7Z340 670 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-206ENST00000609853 PIWIL3Q7Z3Z3 882 aaKnown RBP11.47□□□□□ -0.57
USP6NL-206ENST00000609853 PTOV1Q86YD1 416 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 ZDHHC21Q8IVQ6 265 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 C11orf65Q8NCR3 313 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 ZNF555Q8NEP9 628 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 OR4A15Q8NGL6 344 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 C16orf78Q8WTQ4 265 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 PPCDCQ96CD2 204 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 RIPOR3Q96MK2 946 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 LGR4Q9BXB1 951 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 TRIM4Q9C037 500 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 GABARAPL1Q9H0R8 117 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 CHST8Q9H2A9 424 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 FZD4Q9ULV1 537 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 SCML1Q9UN30 329 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 SH2B3Q9UQQ2 575 aa11.47□□□□□ -0.57
USP6NL-206ENST00000609853 TDRKHQ9Y2W6 561 aaKnown RBP11.47□□□□□ -0.57
USP6NL-206ENST00000609853 VILLO15195 856 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 YY2O15391 372 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 TBX19O60806 448 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 ZNF682O95780 498 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 B3GALT4O96024 378 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 NTSR1P30989 418 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 PEX19P40855 299 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 KIR2DL1P43626 348 aaPredicted RBP11.46□□□□□ -0.57
USP6NL-206ENST00000609853 GALK1P51570 392 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 C2orf80Q0P641 193 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 SLC14A1Q13336 389 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 IRF4Q15306 451 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 DEPDC1Q5TB30 811 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 OR2T5Q6IEZ7 315 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 PARM1Q6UWI2 310 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 B3GNT6Q6ZMB0 384 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 SLC9B2Q86UD5 537 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 TP53I13Q8NBR0 393 aaPredicted RBP11.46□□□□□ -0.57
USP6NL-206ENST00000609853 OR4K1Q8NGD4 311 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 OR2T29Q8NH02 315 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 ASB12Q8WXK4 309 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 FGF14Q92915 247 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 FBXL20Q96IG2 436 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 GABRG3Q99928 467 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 OR51B5Q9H339 312 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 ADPRHL2Q9NX46 363 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 ICKQ9UPZ9 632 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 EXO1Q9UQ84 846 aaKnown RBP11.46□□□□□ -0.57
USP6NL-206ENST00000609853 ERVK-11Q9UQG0 969 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 PRKAB1Q9Y478 270 aa11.46□□□□□ -0.57
USP6NL-206ENST00000609853 MYOCOSA0A1B0GUC4 107 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 A0A1W2PP55 124 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 K7EQS6 105 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF701M0R085 212 aaPredicted RBP11.46□□□□□ -0.58
USP6NL-206ENST00000609853 PLRG1O43660 514 aaKnown RBP11.46□□□□□ -0.58
USP6NL-206ENST00000609853 KDM1AO60341 852 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 SEMG1P04279 462 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 FABP3P05413 133 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 HLCSP50747 726 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 CLCNKAP51800 687 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 SFSWAPQ12872 951 aaKnown RBP11.46□□□□□ -0.58
USP6NL-206ENST00000609853 SF1Q15637 639 aaKnown RBP11.46□□□□□ -0.58
USP6NL-206ENST00000609853 TMEM259Q4ZIN3 620 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 LRRC23Q53EV4 343 aaPredicted RBP11.46□□□□□ -0.58
USP6NL-206ENST00000609853 C2orf27AQ580R0 203 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 RBM48Q5RL73 367 aaKnown RBP11.46□□□□□ -0.58
USP6NL-206ENST00000609853 KHDRBS2Q5VWX1 349 aaKnown RBP11.46□□□□□ -0.58
USP6NL-206ENST00000609853 ANKRD26P1Q6NSI1 321 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 TRIM40Q6P9F5 258 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 SPESP1Q6UW49 350 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 THAP5Q7Z6K1 395 aa11.46□□□□□ -0.58
USP6NL-206ENST00000609853 SLC30A8Q8IWU4 369 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms