RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FGFBP1Q14512 234 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 LARS2Q15031 903 aaKnown RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 TAF1AQ15573 450 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 SV2CQ496J9 727 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 SPOUT1Q5T280 376 aaKnown RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 FAM69AQ5T7M9 428 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 CES4AQ5XG92 561 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 HAGHLQ6PII5 290 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 MBOAT1Q6ZNC8 495 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 SMIM15Q7Z3B0 74 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 PPP1R3BQ86XI6 285 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 L3MBTL4Q8NA19 623 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 FCGR1BQ92637 280 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 ISL2Q96A47 359 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 KIAA1143Q96AT1 154 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 SLITRK1Q96PX8 696 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 KCNS3Q9BQ31 491 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 CMSS1Q9BQ75 279 aaKnown RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 DPCDQ9BVM2 203 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 KANSL2Q9H9L4 492 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 FOLH1BQ9HBA9 442 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 ZFP64Q9NPA5 681 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 APOBEC3BQ9UH17 382 aaKnown RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 MAST2Q6P0Q8 1798 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 CICQ96RK0 1608 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 TCRBV7S2A1N4TA0A589 114 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ADAMDEC1O15204 470 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 GRID2O43424 1007 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 LCMT2O60294 686 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 NRP2O60462 931 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SOAT2O75908 522 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ATG12O94817 140 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 LRIG2O94898 1065 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MPC2O95563 127 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 HSPA4LO95757 839 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 STARD3NLO95772 234 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 COL1A1P02452 1464 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 KITP10721 976 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ADORA1P30542 326 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SHMT2P34897 504 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 CCR5P51681 352 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 LIMK2P53671 638 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 CLDN20P56880 219 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 RBX1P62877 108 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 FKBP3Q00688 224 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 EMX1Q04741 257 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 BIKQ13323 160 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 USP10Q14694 798 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SLC9B1Q4ZJI4 515 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 TRIM61Q5EBN2 209 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 JADE1Q6IE81 842 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 AADACL2Q6P093 401 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 EIF3MQ7L2H7 374 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MAVSQ7Z434 540 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 DDIASQ8IXT1 998 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 FAM71AQ8IYT1 594 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 BLIDQ8IZY5 108 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 LRRC18Q8N456 261 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 UXS1Q8NBZ7 420 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 KIAA0895Q8NCT3 520 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 BEND2Q8NDZ0 799 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 STOML3Q8TAV4 291 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 FBLIM1Q8WUP2 373 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 AKT1S1Q96B36 256 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MISP3Q96FF7 219 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MARK4Q96L34 752 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 OR1F2PQ96R84 312 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 CYP2S1Q96SQ9 504 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 CDC6Q99741 560 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 AGPAT1Q99943 283 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 FEM1AQ9BSK4 669 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MYL10Q9BUA6 226 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 GGACTQ9BVM4 153 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 APOL6Q9BWW8 343 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 PARD6GQ9BYG4 376 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ZDHHC5Q9C0B5 715 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 THAP2Q9H0W7 228 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 CCNB1IP1Q9NPC3 277 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ACP6Q9NPH0 428 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 DYRK4Q9NR20 520 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 AASSQ9UDR5 926 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MARCOQ9UEW3 520 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 STUB1Q9UNE7 303 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 WASF3Q9UPY6 502 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 KCPQ6ZWJ8 1503 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SPATA31A1Q5TZJ5 1347 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SPATA31A5Q5VU36 1347 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SPATA31A7Q8IWB4 1347 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 IGSF9BQ9UPX0 1349 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 GLYATL1P3A0A0U1RQE8 302 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 FAM149AA5PLN7 773 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 E7ESA3 106 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 EI24O14681 340 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 GPRIN2O60269 458 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 CTNSO60931 367 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 PTCD1O75127 700 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ERN1O75460 977 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 NXPH2O95156 264 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms