RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 PDYNP01213 254 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 STATHP02808 62 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 EIF2S1P05198 315 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 SLC35G6P0C7Q6 338 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 JMJD7P0C870 316 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 SMIM10L1P0DMW3 83 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 RPL14P50914 215 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 RPS13P62277 151 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 SNRPNP63162 240 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 RGS1Q08116 209 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 FOXC1Q12948 553 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 GRM7Q14831 915 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 ABRAXAS2Q15018 415 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 SGO1Q5FBB7 561 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 C3orf38Q5JPI3 329 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 PRAMEF17Q5VTA0 474 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 YOD1Q5VVQ6 348 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 GARNL3Q5VVW2 1013 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 TTC19Q6DKK2 380 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 PWWP2BQ6NUJ5 590 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 IGF2-ASQ6U949 168 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 DGLUCYQ7Z3D6 616 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 PPP1R3BQ86XI6 285 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 GPR135Q8IZ08 494 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 ZNF655Q8N720 491 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 KCT2Q8NC54 265 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 SELENOMQ8WWX9 145 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 N4BP2L2Q92802 583 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 SMIM10Q96HG1 83 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 C10orf90Q96M02 699 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 TEFMQ96QE5 360 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 BRF2Q9HAW0 419 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 STARD5Q9NSY2 213 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 PNPOQ9NVS9 261 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 KLK13Q9UKR3 277 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 CCL27Q9Y4X3 112 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 PCDHB3Q9Y5E6 796 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 SLC22A7Q9Y694 548 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 HEATR5BQ9P2D3 2071 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 SPTBN4Q9H254 2564 aa12.05□□□□□ -0.48
CHMP2A-206ENST00000600118 HYKKA2RU49 373 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 TCP11X1B4DZS4 312 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 C9orf172C9J069 976 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 NPIPB8E9PQR5 432 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 ZNF749O43361 778 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 CRCPO75575 148 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 ETHE1O95571 254 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 HSD3B1P14060 373 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 HSD3B2P26439 372 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 HNRNPH1P31943 449 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 MAPK10P53779 464 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 GABREP78334 506 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 CSTF3Q12996 717 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 CUL3Q13618 768 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 DDX39BQ13838 428 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 RTP5Q14D33 572 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 TMEM35AQ53FP2 167 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 DCAF12Q5T6F0 453 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 DEPDC1Q5TB30 811 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 KHDRBS2Q5VWX1 349 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 CEACAM20Q6UY09 585 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 AFAP1L2Q8N4X5 818 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 GBP7Q8N8V2 638 aaPredicted RBP12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 AGR3Q8TD06 166 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 TWIST2Q8WVJ9 160 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 MTFMTQ96DP5 389 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 MS4A6EQ96DS6 147 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 CMTM7Q96FZ5 175 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 FAR2Q96K12 515 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 HBEGFQ99075 208 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 ZPBPQ9BS86 351 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 NLNQ9BYT8 704 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 ASPSCR1Q9BZE9 553 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 ACPTQ9BZG2 426 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 SPRY4Q9C004 299 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 NRSN2Q9GZP1 204 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 KLHL31Q9H511 634 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 MRPS2Q9Y399 296 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 B3GALT1Q9Y5Z6 326 aa12.04□□□□□ -0.48
CHMP2A-206ENST00000600118 KNTC1P50748 2209 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 DCHS1Q96JQ0 3298 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 C4orf51C9J302 202 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 ZNF195O14628 629 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 FOXS1O43638 330 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 EDF1O60869 148 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SCRG1O75711 98 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 DXOO77932 396 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SEMA3DO95025 777 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 TNFSF15O95150 251 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 CHEK2O96017 543 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 TGFB1P01137 390 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 JUNP05412 331 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SERPIND1P05546 499 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 ZNF28P17035 718 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 PTX3P26022 381 aaPredicted RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 ARFIP1P53367 373 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 GYS2P54840 703 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 STXBP1P61764 594 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 PHEXP78562 749 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms