RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SLC22A7Q9Y694 548 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 TLN1Q9Y490 2541 aaKnown RBP26.72■■□□□ 1.87
SSBP4-206ENST00000599699 CFAP46Q8IYW2 2715 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 AGPSO00116 658 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 HNF4AP41235 474 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 MAGEA12P43365 314 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 TMIGD1Q6UXZ0 262 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 LAPTM4BQ86VI4 370 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 PTRH1Q86Y79 214 aaKnown RBP26.72■■□□□ 1.87
SSBP4-206ENST00000599699 PLD6Q8N2A8 252 aaKnown RBP26.72■■□□□ 1.87
SSBP4-206ENST00000599699 CCT6BQ92526 530 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 VPS50Q96JG6 964 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 GPR78Q96P69 363 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 CCDC77Q9BR77 488 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 CPSF2Q9P2I0 782 aaKnown RBP26.72■■□□□ 1.87
SSBP4-206ENST00000599699 NAALAD2Q9Y3Q0 740 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 ASB1Q9Y576 335 aa26.72■■□□□ 1.87
SSBP4-206ENST00000599699 B8ZZF3 427 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 MAP2K7O14733 419 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 KLHL18O94889 574 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 HEXBP07686 556 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 NR1D1P20393 614 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 EMP2P54851 167 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 PFKFB4Q16877 469 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 DCAF10Q5QP82 559 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 TCTN3Q6NUS6 607 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 ABHD13Q7L211 337 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 TTLQ8NG68 377 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 UBTD2Q8WUN7 234 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 UBLCP1Q8WVY7 318 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-206ENST00000599699 EHD1Q9H4M9 534 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 ZNF358Q9NW07 568 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 FBXL4Q9UKA2 621 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 ANGPTL3Q9Y5C1 460 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 HS3ST3B1Q9Y662 390 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 SPTA1P02549 2419 aa26.71■■□□□ 1.87
SSBP4-206ENST00000599699 URADA6NGE7 173 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 ZNF860A6NHJ4 632 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 ESPNB1AK53 854 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 IDSB3KWA1 339 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 K7EPI3 171 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 SOCS6O14544 535 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 RDH16O75452 317 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 RBP1P09455 135 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 ZNF888P0CJ79 500 aaPredicted RBP26.7■■□□□ 1.86
SSBP4-206ENST00000599699 MTHFD2P13995 350 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 ALOX12P18054 663 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 TNFRSF8P28908 595 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 SKP1P63208 163 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 IRF8Q02556 426 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 DOC2AQ14183 400 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 TSNAXIP1Q2TAA8 658 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 DEFB134Q4QY38 66 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 MFSD4BQ5TF39 518 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 ASB18Q6ZVZ8 466 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 PDSS2Q86YH6 399 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 ZC3H7AQ8IWR0 971 aaKnown RBP26.7■■□□□ 1.86
SSBP4-206ENST00000599699 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.7■■□□□ 1.86
SSBP4-206ENST00000599699 OR51Q1Q8NH59 317 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 MTBPQ96DY7 904 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 PTCD3Q96EY7 689 aaKnown RBP26.7■■□□□ 1.86
SSBP4-206ENST00000599699 TGIF2Q9GZN2 237 aa26.7■■□□□ 1.86
SSBP4-206ENST00000599699 COL6A2P12110 1019 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 GCAP28676 217 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 PGDP52209 483 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 ALDH18A1P54886 795 aaKnown RBP26.69■■□□□ 1.86
SSBP4-206ENST00000599699 CHIT1Q13231 466 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 RAPSNQ13702 412 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 HIST2H2ACQ16777 129 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-206ENST00000599699 TECRLQ5HYJ1 363 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 TOR1AIP1Q5JTV8 583 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 HIST2H2AA3Q6FI13 130 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 FAAH2Q6GMR7 532 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 ADGRD1Q6QNK2 874 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 KIRREL2Q6UWL6 708 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 ZNF605Q86T29 641 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 EFCAB11Q9BUY7 163 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 PITHD1Q9GZP4 211 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-206ENST00000599699 ANKZF1Q9H8Y5 726 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 ATP13A2Q9NQ11 1180 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 MKL2Q9ULH7 1088 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 COL6A6A6NMZ7 2263 aa26.69■■□□□ 1.86
SSBP4-206ENST00000599699 ANKDD1BA6NHY2 528 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 K7EM74 188 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 MASP2O00187 686 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 BMP10O95393 424 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 SERPINA6P08185 405 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 ACPPP15309 386 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 EPB42P16452 691 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 XCR1P46094 333 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 RAB8AP61006 207 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 SETDB1Q15047 1291 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 TUBB8Q3ZCM7 444 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 MINDY4Q4G0A6 757 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 PAGE2BQ5JRK9 111 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 PRICKLE2Q7Z3G6 844 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 AFAP1L2Q8N4X5 818 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 TEX9Q8N6V9 391 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 FDCSPQ8NFU4 85 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 CREB3L4Q8TEY5 395 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms