RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 KLC3Q6P597 504 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 ADGRD1Q6QNK2 874 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 TMIGD1Q6UXZ0 262 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 PDSS2Q86YH6 399 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 PRSS58Q8IYP2 241 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 UBTD2Q8WUN7 234 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 WDR34Q96EX3 536 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 CRB3Q9BUF7 120 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 ANKZF1Q9H8Y5 726 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 ANKHQ9HCJ1 492 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 ZNF71Q9NQZ8 489 aaPredicted RBP15.86■□□□□ 0.13
SSBP4-204ENST00000597724 C14orf105Q9NVL8 296 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 ZNF358Q9NW07 568 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 COPG2Q9UBF2 871 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 PCDHGA9Q9Y5G4 932 aaKnown RBP15.86■□□□□ 0.13
SSBP4-204ENST00000597724 HS3ST3B1Q9Y662 390 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 K7EM74 188 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 SGK494L7N484 410 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 KLK8O60259 260 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 COL6A2P12110 1019 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 MAT1AQ00266 395 aaKnown RBP15.85■□□□□ 0.13
SSBP4-204ENST00000597724 RGS1Q08116 209 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 HYAL2Q12891 473 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 DOC2AQ14183 400 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 SLBPQ14493 270 aaKnown RBP eCLIP15.85■□□□□ 0.13
SSBP4-204ENST00000597724 HERC3Q15034 1050 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 TECRLQ5HYJ1 363 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 LGSNQ5TDP6 509 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 KIRREL2Q6UWL6 708 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 LRRC70Q7Z2Q7 622 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 KRT78Q8N1N4 520 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 AFAP1L2Q8N4X5 818 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 SNX31Q8N9S9 440 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 CREB3L4Q8TEY5 395 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■■■■■ 52.4
SSBP4-204ENST00000597724 PTCD3Q96EY7 689 aaKnown RBP15.85■□□□□ 0.13
SSBP4-204ENST00000597724 FER1L6-AS2Q96M78 137 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 SLC6A16Q9GZN6 736 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 PITHD1Q9GZP4 211 aaPredicted RBP15.85■□□□□ 0.13
SSBP4-204ENST00000597724 NT5DC2Q9H857 520 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 MLXIPLQ9NP71 852 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 FETUBQ9UGM5 382 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 C3orf18Q9UK00 162 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 TP53TG5Q9Y2B4 290 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 NAALAD2Q9Y3Q0 740 aa15.85■□□□□ 0.13
SSBP4-204ENST00000597724 ESPNB1AK53 854 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 IDSB3KWA1 339 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 K7EPI3 171 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 BMP10O95393 424 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 SERPINA6P08185 405 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 ALOX12P18054 663 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 CASP2P42575 452 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 EMP2P54851 167 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 ALDH18A1P54886 795 aaKnown RBP15.84■□□□□ 0.13
SSBP4-204ENST00000597724 PCDH1Q08174 1060 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 E2F2Q14209 437 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 SETDB1Q15047 1291 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 RBBP7Q16576 425 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 PFKFB4Q16877 469 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 LACTB2Q53H82 288 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-204ENST00000597724 XKR6Q5GH73 641 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 TIFABQ6ZNK6 161 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 ZC3H7AQ8IWR0 971 aaKnown RBP15.84■□□□□ 0.13
SSBP4-204ENST00000597724 SHISA5Q8N114 240 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 CLEC1AQ8NC01 280 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 TTLQ8NG68 377 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 OR51Q1Q8NH59 317 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 EFCAB11Q9BUY7 163 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 SLC25A23Q9BV35 468 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 OPTCQ9UBM4 332 aa15.84■□□□□ 0.13
SSBP4-204ENST00000597724 ZNF490Q9ULM2 529 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-204ENST00000597724 FASNP49327 2511 aaKnown RBP15.84■□□□□ 0.13
SSBP4-204ENST00000597724 NUP210LQ5VU65 1888 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 URADA6NGE7 173 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 MASP2O00187 686 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 GALR3O60755 368 aaPredicted RBP15.83■□□□□ 0.12
SSBP4-204ENST00000597724 RDH16O75452 317 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 WFS1O76024 890 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 KLHL18O94889 574 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 RBP1P09455 135 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 ZNF888P0CJ79 500 aaPredicted RBP15.83■□□□□ 0.12
SSBP4-204ENST00000597724 SMIM10L1P0DMW3 83 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 GFAPP14136 432 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 CD22P20273 847 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 NR1D1P20393 614 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 GSTM2P28161 218 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 SOX8P57073 446 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 IRF8Q02556 426 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 CHIT1Q13231 466 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 TBCCQ15814 346 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 TSNAXIP1Q2TAA8 658 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 DEFB134Q4QY38 66 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 NIPAL1Q6NVV3 410 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 ABHD13Q7L211 337 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.83■□□□□ 0.122e-7■■■■■ 278.5
SSBP4-204ENST00000597724 FDCSPQ8NFU4 85 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 OR11G2Q8NGC1 345 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 UTP15Q8TED0 518 aaKnown RBP15.83■□□□□ 0.12
SSBP4-204ENST00000597724 MTBPQ96DY7 904 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 SMIM10Q96HG1 83 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms