RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 CBX6O95503 412 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 SERPINA7P05543 415 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 CXCR2P25025 360 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 CASQ1P31415 396 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 TSFMP43897 325 aaKnown RBP12.32□□□□□ -0.44
LIG1-212ENST00000596549 SLC6A12P48065 614 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 GLRBP48167 497 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 OLR1P78380 273 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 HYAL2Q12891 473 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 ZNF169Q14929 603 aaPredicted RBP12.32□□□□□ -0.44
LIG1-212ENST00000596549 EFTUD2Q15029 972 aaKnown RBP eCLIP12.32□□□□□ -0.44
LIG1-212ENST00000596549 ZKSCAN8Q15776 578 aaPredicted RBP12.32□□□□□ -0.44
LIG1-212ENST00000596549 EIF2S3LQ2VIR3 472 aaKnown RBP12.32□□□□□ -0.44
LIG1-212ENST00000596549 MINDY4Q4G0A6 757 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 B3GNTL1Q67FW5 361 aaPredicted RBP12.32□□□□□ -0.44
LIG1-212ENST00000596549 MAATS1Q7Z4T9 603 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 ADAMTSL2Q86TH1 951 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 KLHDC8AQ8IYD2 350 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 SPATA6LQ8N4H0 392 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 CATSPER1Q8NEC5 780 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 NT5CQ8TCD5 201 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 RHBDF1Q96CC6 855 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 PEX11GQ96HA9 241 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 PSMG3-AS1Q96PY0 264 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 GPR22Q99680 433 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 EGFL8Q99944 293 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 FAM129AQ9BZQ8 928 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 PHACTR1Q9C0D0 580 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 SLC6A16Q9GZN6 736 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 DERL2Q9GZP9 239 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 PELI2Q9HAT8 420 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 LANCL2Q9NS86 450 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 HIVEP3Q5T1R4 2406 aa12.32□□□□□ -0.44
LIG1-212ENST00000596549 UNC79Q9P2D8 2635 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 LRRK2Q5S007 2527 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 GALR3O60755 368 aaPredicted RBP12.31□□□□□ -0.44
LIG1-212ENST00000596549 CDC123O75794 336 aaPredicted RBP12.31□□□□□ -0.44
LIG1-212ENST00000596549 CYC1P08574 325 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 ZNF888P0CJ79 500 aaPredicted RBP12.31□□□□□ -0.44
LIG1-212ENST00000596549 VARSP26640 1264 aaKnown RBP12.31□□□□□ -0.44
LIG1-212ENST00000596549 GDF5P43026 501 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 POU4F1Q01851 419 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 RHAGQ02094 409 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 PWP1Q13610 501 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 CSHL1Q14406 222 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 TGFBIQ15582 683 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 DEFB134Q4QY38 66 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 FHL5Q5TD97 284 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 MFSD4BQ5TF39 518 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 NXPE4Q6UWF7 544 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 RIPOR1Q6ZS17 1223 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 FRA10AC1Q70Z53 315 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 ANKRD37Q7Z713 158 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.31□□□□□ -0.44
LIG1-212ENST00000596549 DNAJB14Q8TBM8 379 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 TSLPQ969D9 159 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 CYTH2Q99418 400 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 CPNE1Q99829 537 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 TUBB6Q9BUF5 446 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 CTNNAL1Q9UBT7 734 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 ZFP69BQ9UJL9 534 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 DYRK1BQ9Y463 629 aa12.31□□□□□ -0.44
LIG1-212ENST00000596549 COPG1Q9Y678 874 aaKnown RBP12.31□□□□□ -0.44
LIG1-212ENST00000596549 NCF1BA6NI72 391 aaPredicted RBP12.3□□□□□ -0.44
LIG1-212ENST00000596549 NCF1CA8MVU1 366 aaPredicted RBP12.3□□□□□ -0.44
LIG1-212ENST00000596549 TAPBPO15533 448 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 PRAMEF4O60810 478 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 FAM155BO75949 473 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 WDR47O94967 919 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 AGFG2O95081 481 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 F10P00742 488 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 SERPIND1P05546 499 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 NCF1P14598 390 aaPredicted RBP12.3□□□□□ -0.44
LIG1-212ENST00000596549 CD1DP15813 335 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 ALOX12P18054 663 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 AHRP35869 848 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 GP5P40197 560 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 PLTPP55058 493 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 CDC16Q13042 620 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 USP10Q14694 798 aaKnown RBP12.3□□□□□ -0.44
LIG1-212ENST00000596549 HERC3Q15034 1050 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 TLR1Q15399 786 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 OR4D1Q15615 310 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 KBTBD12Q3ZCT8 623 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 FBXO48Q5FWF7 155 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 UBAP2Q5T6F2 1119 aaKnown RBP12.3□□□□□ -0.44
LIG1-212ENST00000596549 PRAMEF9Q5VWM5 478 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 ADNP2Q6IQ32 1131 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 CPEB2Q7Z5Q1 589 aaKnown RBP12.3□□□□□ -0.44
LIG1-212ENST00000596549 GRHL3Q8TE85 626 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 UTP15Q8TED0 518 aaKnown RBP12.3□□□□□ -0.44
LIG1-212ENST00000596549 CREB3L4Q8TEY5 395 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 CDKL2Q92772 493 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 OR1F2PQ96R84 312 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 LMF1Q96S06 567 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 RAB17Q9H0T7 212 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 LRRC4CQ9HCJ2 640 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 PLA2G3Q9NZ20 509 aa12.3□□□□□ -0.44
LIG1-212ENST00000596549 UTP20O75691 2785 aaKnown RBP12.3□□□□□ -0.44
LIG1-212ENST00000596549 ESYT3A0FGR9 886 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms