RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CRYBG3Q68DQ2 2970 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 SUSD1Q6UWL2 747 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 SRRM1Q8IYB3 904 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 MAGEB10Q96LZ2 347 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 L2HGDHQ9H9P8 463 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 PLA2G3Q9NZ20 509 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 NINJ2Q9NZG7 142 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 COPG2Q9UBF2 871 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 ARHGAP10A1A4S6 786 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 PRSS44E7EML9 344 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 TXNDC9O14530 226 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 WFS1O76024 890 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 C1QAP02745 245 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 HEXBP07686 556 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 ANXA5P08758 320 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 RHOXF2BP0C7M4 288 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 ICAM2P13598 275 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 EZRP15311 586 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 HRH2P25021 359 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 IMPA1P29218 277 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 KCNK10P57789 538 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 EEF1A2Q05639 463 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 ART3Q13508 389 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 HKDC1Q2TB90 917 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 ICE2Q659A1 982 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 AGTRAPQ6RW13 159 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 TMEM205Q6UW68 189 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 SIRT6Q8N6T7 355 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 RERGQ96A58 199 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 MMABQ96EY8 250 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 RHOXF2Q9BQY4 288 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 YIPF2Q9BWQ6 316 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 ZNF700Q9H0M5 742 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 CCDC177Q9NQR7 707 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 ARL15Q9NXU5 204 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 ABI3Q9P2A4 366 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 CTNNAL1Q9UBT7 734 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 TAC3Q9UHF0 121 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 NFU1Q9UMS0 254 aa16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 KLF2Q9Y5W3 355 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-203ENST00000594298 FFAR3O14843 346 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 GPR42O15529 346 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 FOXS1O43638 330 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 CRABP2P29373 138 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 RAB10P61026 200 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 FAM53BQ14153 422 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 PCOLCEQ15113 449 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 TMEM207Q6UWW9 146 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 ADAMTSL2Q86TH1 951 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 SPNS2Q8IVW8 549 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 CEP97Q8IW35 865 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 LRRC56Q8IYG6 542 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 PPFIBP2Q8ND30 876 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 DNAJB8Q8NHS0 232 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 FUT8Q9BYC5 575 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 DERL2Q9GZP9 239 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 DRC3Q9H069 523 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 CDC42EP4Q9H3Q1 356 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 ACSS3Q9H6R3 686 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 ABCF3Q9NUQ8 709 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 IKBKGQ9Y6K9 419 aa16.6■□□□□ 0.25
SHKBP1-203ENST00000594298 CENPEQ02224 2701 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 ZNF500O60304 480 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 RASAL1O95294 804 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 WDPCPO95876 746 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 CRYABP02511 175 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 CELA2AP08217 269 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 CYC1P08574 325 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 MYBL2P10244 700 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 ELAVL4P26378 380 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 ECHS1P30084 290 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 PGGT1BP53609 377 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 ATP6V0D1P61421 351 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 ZNF460Q14592 562 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 NAA30Q147X3 362 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 PHKG1Q16816 387 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 FAAH2Q6GMR7 532 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 CAPN13Q6MZZ7 669 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 GFRALQ6UXV0 394 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 FRA10AC1Q70Z53 315 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 CCDC91Q7Z6B0 441 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 ZC3H7AQ8IWR0 971 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 ITLN2Q8WWU7 325 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 FBXL8Q96CD0 374 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 MOCOSQ96EN8 888 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 IMMP1LQ96LU5 166 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 HAUS8Q9BT25 410 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 TUBB6Q9BUF5 446 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 UNKQ9C0B0 810 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 RUBCNLQ9H714 662 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 CAB39LQ9H9S4 337 aa16.59■□□□□ 0.25
SHKBP1-203ENST00000594298 A0A087WUV0 522 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 A0A0A6YYC8 382 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 OR5H15A6NDH6 313 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 I3L1I5 382 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 ACSL3O95573 720 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 CCDC166P0CW27 439 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms