RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CENPLQ8N0S6 344 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 TCAIMQ8N3R3 496 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 TBC1D19Q8N5T2 526 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 PDPRQ8NCN5 879 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 NXNL1Q96CM4 212 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 TRIM44Q96DX7 344 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 ATOH8Q96SQ7 321 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 VN1R1Q9GZP7 353 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 ALG9Q9H6U8 611 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 NMRAL1Q9HBL8 299 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 ZBTB20Q9HC78 741 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 HCN3Q9P1Z3 774 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 MKL2Q9ULH7 1088 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 UBR5O95071 2799 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 LOC102723996A0A087X1L8 192 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 MAP2K7O14733 419 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 DNAJB6O75190 326 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 RDH16O75452 317 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 ACSL3O95573 720 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 B3GALT4O96024 378 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 HPP00738 406 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 SERPIND1P05546 499 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 C2P06681 752 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 LTA4HP09960 611 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 COX6A1P12074 109 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 TFEBP19484 476 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 XCR1P46094 333 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 HSPA7P48741 367 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 FOXK1P85037 733 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 CDC16Q13042 620 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 HERC3Q15034 1050 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 RBBP5Q15291 538 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 FAAH2Q6GMR7 532 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 JMJD6Q6NYC1 403 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 NDUFAF7Q7L592 441 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 TBC1D1Q86TI0 1168 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 CEP112Q8N8E3 955 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 Q8NA96 180 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 TRPV3Q8NET8 790 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 STAG3L4Q8TBR4 150 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 CREB3L4Q8TEY5 395 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 VPS50Q96JG6 964 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 MFRPQ9BY79 579 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 SLC6A16Q9GZN6 736 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 AICDAQ9GZX7 198 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 CNOT10Q9H9A5 744 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 ZNF160Q9HCG1 818 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 WWOXQ9NZC7 414 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 GPRC5BQ9NZH0 403 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 CD274Q9NZQ7 290 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 RNF112Q9ULX5 631 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 ACOT9Q9Y305 439 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 ASB1Q9Y576 335 aa17.48■□□□□ 0.39
SHKBP1-202ENST00000593764 IGHV1-45A0A0A0MS14 117 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 OR2W5A6NFC9 320 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 KLHL41O60662 606 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 GALR3O60755 368 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 STK16O75716 305 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 IPO13O94829 963 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 SORBS2O94875 1100 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 ZIC2O95409 532 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 ALDOAP04075 364 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 ALPPP05187 535 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 ZNF888P0CJ79 500 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 SMIM10L1P0DMW3 83 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 ALOX12P18054 663 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 EPORP19235 508 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 IRF9Q00978 393 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 KCNC4Q03721 635 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 RGS1Q08116 209 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 SLC6A19Q695T7 634 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 AMER2Q8N7J2 671 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 OR5T3Q8NGG3 340 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 UTP15Q8TED0 518 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 KCTD4Q8WVF5 259 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 SLC44A1Q8WWI5 657 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 SMIM10Q96HG1 83 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 LHPPQ9H008 270 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 KLHL31Q9H511 634 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 SNX15Q9NRS6 342 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 DNAJC11Q9NVH1 559 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 COPG2Q9UBF2 871 aa17.47■□□□□ 0.39
SHKBP1-202ENST00000593764 ZNF860A6NHJ4 632 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 C4orf51C9J302 202 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 PCDH17O14917 1159 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 KERAO60938 352 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 H2AFYO75367 372 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 SERPINA6P08185 405 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 MTHFD2P13995 350 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 CXCR2P25025 360 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 EEF1A2Q05639 463 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 PCOLCEQ15113 449 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 UAP1Q16222 522 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 DEFB134Q4QY38 66 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 IGFL2Q6UWQ7 119 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 CCDC91Q7Z6B0 441 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 EXT2Q93063 718 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 MIB2Q96AX9 1013 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 THOC3Q96J01 351 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 GPR78Q96P69 363 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms