RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 TMEM52BQ4KMG9 183 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 ZNF385BQ569K4 471 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.93■□□□□ 0.141e-6■■■■■ 34
PRKCSH-217ENST00000592741 FBXO46Q6PJ61 603 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 XKR5Q6UX68 686 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 ZNF547Q8IVP9 402 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 LRRC56Q8IYG6 542 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 BPIFB6Q8NFQ5 453 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 OR2L2Q8NH16 312 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 PHOSPHO2Q8TCD6 241 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 UBE2E3Q969T4 207 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 ZFYVE19Q96K21 471 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 NODALQ96S42 347 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 PLGRKTQ9HBL7 147 aa15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 EXO1Q9UQ84 846 aaKnown RBP15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 MUC22E2RYF6 1773 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-217ENST00000592741 C5orf67F2Z3F1 127 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 TMX2-CTNND1H3BSU7 103 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 DPM1O60762 260 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 JRKO75564 520 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 ANGPTL1O95841 491 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 TGFB1P01137 390 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 CYP4B1P13584 511 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 EMP3P54852 163 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 NFE2L1Q14494 772 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 FGD3Q5JSP0 725 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 GTF2IRD2BQ6EKJ0 949 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 ANGPTL8Q6UXH0 198 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 UNC5DQ6UXZ4 953 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 ARMCX6Q7L4S7 300 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 SPRED2Q7Z698 418 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 GTF2IRD2Q86UP8 949 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 GOT1L1Q8NHS2 421 aaPredicted RBP15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 CNIH3Q8TBE1 160 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 CXorf40AQ8TE69 158 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 MUL1Q969V5 352 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 APOL4Q9BPW4 351 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 THUMPD1Q9NXG2 353 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 NAALAD2Q9Y3Q0 740 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 GMPPBQ9Y5P6 360 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 PI15O43692 258 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 DNAJB5O75953 348 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 C9P02748 559 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 ACADLP28330 430 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 CRATP43155 626 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 RXRGP48443 463 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 CLK3P49761 638 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 PIGFQ07326 219 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 NFATC3Q12968 1075 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 SIM2Q14190 667 aaPredicted RBP15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 ZNF234Q14588 700 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 ERN2Q76MJ5 926 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 CROCCP3Q8IVE0 287 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 NAGSQ8N159 534 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 LMNTD1Q8N9Z9 388 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 TTC29Q8NA56 475 aaPredicted RBP15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 ATG16L2Q8NAA4 619 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.92■□□□□ 0.143e-14■□□□□ 10.9
PRKCSH-217ENST00000592741 C16orf78Q8WTQ4 265 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 SETD7Q8WTS6 366 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 MAL2Q969L2 176 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 PPCDCQ96CD2 204 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 FAM129BQ96TA1 746 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 OR51B5Q9H339 312 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 MYNNQ9NPC7 610 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 KRT84Q9NSB2 600 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 TCF20Q9UGU0 1960 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 PCM1Q15154 2024 aa15.92■□□□□ 0.14
PRKCSH-217ENST00000592741 PTGES3LE9PB15 166 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 SAP18O00422 153 aaKnown RBP15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 FURINP09958 794 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 ITIH1P19827 911 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 PIK3CBP42338 1070 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 MAPK10P53779 464 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 PLA2G16P53816 162 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 KCNJ10P78508 379 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 C2orf80Q0P641 193 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 PDE7AQ13946 482 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 GAB4Q2WGN9 574 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 PRAMEF14Q5SWL7 426 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 PRAMEF13Q5VWM6 474 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 METTL4Q8N3J2 472 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 OR4K1Q8NGD4 311 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 WDR48Q8TAF3 677 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 EPYCQ99645 322 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 SLC35A5Q9BS91 424 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 DOHHQ9BU89 302 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 ZDHHC5Q9C0B5 715 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 CCDC90BQ9GZT6 254 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 WARS2Q9UGM6 360 aaKnown RBP15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 NUP214P35658 2090 aaPredicted RBP15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 HEPACAM2A8MVW5 462 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 C1QTNF3-AMACRE9PGA6 284 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 M0QX08 132 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 C6orf47O95873 294 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 GBAP04062 536 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 RB1P06400 928 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 AQP1P29972 269 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 ENTPD1P49961 510 aa15.91■□□□□ 0.14
PRKCSH-217ENST00000592741 HBA1P69905 142 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms