RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 AGR3Q8TD06 166 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 SLC13A3Q8WWT9 602 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 SLC46A1Q96NT5 459 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 SCNM1Q9BWG6 230 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 NLNQ9BYT8 704 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 MID1IP1Q9NPA3 183 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 PISDQ9UG56 409 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 USH1CQ9Y6N9 552 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 AHCTF1Q8WYP5 2266 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ZSCAN9O15535 394 aaPredicted RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 CLEC3AO75596 197 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 DXOO77932 396 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 OR4F21O95013 312 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ETV5P41161 510 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 PIK3CBP42338 1070 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ZNF33BQ06732 778 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 CYP4F3Q08477 520 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 GRM7Q14831 915 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 PRTGQ2VWP7 1150 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 SYVN1Q86TM6 617 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ASPGQ86U10 573 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 MARCH9Q86YJ5 346 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ZNF781Q8N8C0 355 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 SLC29A3Q9BZD2 475 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 SHCBP1LQ9BZQ2 653 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 APMAPQ9HDC9 416 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 PPT2Q9UMR5 302 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 MSRB2Q9Y3D2 182 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 AGRPO00253 132 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 SERPINA6P08185 405 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 SLC35G6P0C7Q6 338 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 MAPK10P53779 464 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 GABREP78334 506 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 ZRSR2Q15696 482 aaKnown RBP16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 FAM214AQ32MH5 1076 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 GARNL3Q5VVW2 1013 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 FAM219BQ5XKK7 198 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 FRG2Q64ET8 278 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 MAVSQ7Z434 540 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 WDR20Q8TBZ3 569 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 METTL6Q8TCB7 284 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 CREB3L4Q8TEY5 395 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 FRG2BQ96QU4 278 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 SPRTNQ9H040 489 aaPredicted RBP16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 SYNPO2LQ9H987 977 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 KLK13Q9UKR3 277 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 SNX6Q9UNH7 406 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 PCDHB3Q9Y5E6 796 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 PCDHGA7Q9Y5G6 932 aa16.28■□□□□ 0.2
RPRD1A-209ENST00000590898 TNFSF15O95150 251 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 HSPA4LO95757 839 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 HBQ1P09105 142 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 RBMS1P29558 406 aaKnown RBP16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 ARFIP2P53365 341 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 ARSFP54793 590 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 AQP5P55064 265 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 CCDC121Q6ZUS5 278 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 CUZD1Q86UP6 607 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 KIRREL3Q8IZU9 778 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 CSNK1A1LQ8N752 337 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 PIWIL2Q8TC59 973 aaKnown RBP16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 NT5CQ8TCD5 201 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 USP7Q93009 1102 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 EBF4Q9BQW3 602 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 B3GALT1Q9Y5Z6 326 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 SCN3AQ9NY46 2000 aa16.27■□□□□ 0.2
RPRD1A-209ENST00000590898 FOXE1O00358 373 aaPredicted RBP16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 UBOX5O94941 541 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 KRT6AP02538 564 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 KRT6BP04259 564 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 EIF2S1P05198 315 aaKnown RBP16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 CAPN1P07384 714 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 UROSP10746 265 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 GCGRP47871 477 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 KRT6CP48668 564 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 SHC2P98077 582 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 RGS1Q08116 209 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 PWWP2BQ6NUJ5 590 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 ERMP1Q7Z2K6 904 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 CDYL2Q8N8U2 506 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 HUS1BQ8NHY5 278 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 MYLK2Q9H1R3 596 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 SRPK3Q9UPE1 567 aa16.27■□□□□ 0.19
RPRD1A-209ENST00000590898 PMS2P1A4D2B8 440 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 TRABD2BA6NFA1 517 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 URADA6NGE7 173 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 KIAA0754O94854 1291 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 CTSBP07858 339 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 HMOX2P30519 316 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 PHEXP78562 749 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 FAM53BQ14153 422 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 YTHDF3Q7Z739 585 aaKnown RBP16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 CLYBLQ8N0X4 340 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 TTC29Q8NA56 475 aaPredicted RBP16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 CTRCQ99895 268 aa16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 ILKAPQ9H0C8 392 aaPredicted RBP16.26■□□□□ 0.19
RPRD1A-209ENST00000590898 ELOVL6Q9H5J4 265 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms