RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SLC6A12P48065 614 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 KCNC1P48547 511 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 HSPA7P48741 367 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 CSRP3P50461 194 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 SOX8P57073 446 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 EEF1A2Q05639 463 aaKnown RBP11.44□□□□□ -0.58
TPM4-212ENST00000590180 DLG1Q12959 904 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 BMPR2Q13873 1038 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 HERC3Q15034 1050 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 ATG9BQ674R7 924 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 SLCO4C1Q6ZQN7 724 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 NDUFAF7Q7L592 441 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 ISCA2Q86U28 154 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 HPS6Q86YV9 775 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 ZC3H7AQ8IWR0 971 aaKnown RBP11.44□□□□□ -0.58
TPM4-212ENST00000590180 ZADH2Q8N4Q0 377 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 TRPV3Q8NET8 790 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 METTL21AQ8WXB1 218 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 NXNL1Q96CM4 212 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 FMO2Q99518 471 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 SARGQ9BW04 601 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 DNAJC11Q9NVH1 559 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 LUZP4Q9P127 313 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 SLC22A7Q9Y694 548 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 IKBKGQ9Y6K9 419 aa11.44□□□□□ -0.58
TPM4-212ENST00000590180 URADA6NGE7 173 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 ZNF860A6NHJ4 632 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 SUPT3HB4E1H0 165 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 CCNT2O60583 730 aaKnown RBP11.43□□□□□ -0.58
TPM4-212ENST00000590180 RDH16O75452 317 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 SUPT3HO75486 399 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 C2P06681 752 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 ALOX12P18054 663 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 TYK2P29597 1187 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 GGT5P36269 586 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 RAB8AP61006 207 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 REEP5Q00765 189 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 CDC16Q13042 620 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 DEFB134Q4QY38 66 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 CDKL4Q5MAI5 379 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 AGAP7PQ5VUJ5 663 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 JMJD6Q6NYC1 403 aaPredicted RBP11.43□□□□□ -0.58
TPM4-212ENST00000590180 ABHD13Q7L211 337 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 PDSS2Q86YH6 399 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 RELL1Q8IUW5 271 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 IFT20Q8IY31 132 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 KBTBD2Q8IY47 623 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 SHISA5Q8N114 240 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 KRT78Q8N1N4 520 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 RBMXL3Q8N7X1 1067 aaKnown RBP11.43□□□□□ -0.58
TPM4-212ENST00000590180 OR5T3Q8NGG3 340 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 UHMK1Q8TAS1 419 aaKnown RBP11.43□□□□□ -0.58
TPM4-212ENST00000590180 NT5CQ8TCD5 201 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 KCTD4Q8WVF5 259 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 CCT6BQ92526 530 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 TM9SF4Q92544 642 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 PEX11GQ96HA9 241 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 AGAP4Q96P64 663 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 TMEM79Q9BSE2 394 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 LHPPQ9H008 270 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 CDC42EP4Q9H3Q1 356 aaKnown RBP11.43□□□□□ -0.58
TPM4-212ENST00000590180 KLHL31Q9H511 634 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 CLMPQ9H6B4 373 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 ACSS3Q9H6R3 686 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 ZBTB20Q9HC78 741 aaPredicted RBP11.43□□□□□ -0.58
TPM4-212ENST00000590180 IGSF5Q9NSI5 407 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 GPRC5BQ9NZH0 403 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 MAP10Q9P2G4 905 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 PTBP2Q9UKA9 531 aaKnown RBP11.43□□□□□ -0.58
TPM4-212ENST00000590180 PLAAQ9Y263 795 aa11.43□□□□□ -0.58
TPM4-212ENST00000590180 PCSK5Q92824 1860 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 A0A087X1B8 175 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 A0A096LPK6 155 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 OR2W5A6NFC9 320 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 POC1B-GALNT4F8VUJ3 575 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 CHST10O43529 356 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 DNAJB6O75190 326 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 WFS1O76024 890 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 B3GALT4O96024 378 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 UQCRHP07919 91 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 INHBAP08476 426 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 RHOXF2BP0C7M4 288 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 ZNF888P0CJ79 500 aaPredicted RBP11.42□□□□□ -0.58
TPM4-212ENST00000590180 C8orf89P0DMQ9 161 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 COX6A1P12074 109 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 GLRBP48167 497 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 SKP1P63208 163 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 OLR1P78380 273 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 Q0VFX4 171 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 SLBPQ14493 270 aaKnown RBP eCLIP11.42□□□□□ -0.58
TPM4-212ENST00000590180 HIST2H2ACQ16777 129 aaPredicted RBP11.42□□□□□ -0.58
TPM4-212ENST00000590180 FAM83EQ2M2I3 478 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 PLEKHN1Q494U1 663 aaPredicted RBP11.42□□□□□ -0.58
TPM4-212ENST00000590180 XKR6Q5GH73 641 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 TOR1AIP1Q5JTV8 583 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 UBAP2Q5T6F2 1119 aaKnown RBP11.42□□□□□ -0.58
TPM4-212ENST00000590180 HIST2H2AA3Q6FI13 130 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 TMIGD1Q6UXZ0 262 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 KLHDC8AQ8IYD2 350 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms