RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CES2O00748 559 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 NDUFS4O43181 175 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 CDC123O75794 336 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 SERPIND1P05546 499 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 MEF2AQ02078 507 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 MEP1AQ16819 746 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 MSS51Q4VC12 460 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 SP5Q6BEB4 398 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 NIPAL1Q6NVV3 410 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 MTFR2Q6P444 385 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 PAPD4Q6PIY7 484 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 GALNT7Q86SF2 657 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 TICAM1Q8IUC6 712 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 PLPP5Q8NEB5 264 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 OR4K1Q8NGD4 311 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 OR56A3Q8NH54 315 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 MARVELD3Q96A59 401 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 UTP23Q9BRU9 249 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 MMP25Q9NPA2 562 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 CORO1CQ9ULV4 474 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 SNX12Q9UMY4 172 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 VWA7Q9Y334 891 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 PCNX1Q96RV3 2341 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 TRBC2A0A5B9 178 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 MAGEB17A8MXT2 336 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 CCL21O00585 134 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 TTI1O43156 1089 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 ZSCAN12O43309 604 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 GUCA1CO95843 209 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 TSPAN12O95859 305 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 CASP6P55212 293 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 OR4D2P58180 307 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 RHAGQ02094 409 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 RGS1Q08116 209 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 PWP1Q13610 501 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 TUBA3CQ13748 450 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 CSHL1Q14406 222 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 NAA30Q147X3 362 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 TEDDM1Q5T9Z0 273 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 HECTD2Q5U5R9 776 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 FAM45BPQ6NSW5 357 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 TUBA3EQ6PEY2 450 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 CRLF3Q8IUI8 442 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 IGDCC3Q8IVU1 814 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 PDIK1LQ8N165 341 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 SLC5A8Q8N695 610 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 ZNF740Q8NDX6 193 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 OR5T3Q8NGG3 340 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 FAM45AQ8TCE6 357 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 TBC1D20Q96BZ9 403 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 FBXL8Q96CD0 374 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 CFAP36Q96G28 342 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 SARGQ9BW04 601 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 DDX47Q9H0S4 455 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 RUBCNLQ9H714 662 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 PCDHGB6Q9Y5F9 930 aa16.89■□□□□ 0.29
PRKCSH-211ENST00000590098 GALR3O60755 368 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 WISP2O76076 250 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 FHP07954 510 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 ENO2P09104 434 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 CD46P15529 392 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 ALOX12P18054 663 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 JAK1P23458 1154 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 TAS2R50P59544 299 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 PMP22Q01453 160 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 DEFB134Q4QY38 66 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 HP1BP3Q5SSJ5 553 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 ABHD13Q7L211 337 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 AFAP1L2Q8N4X5 818 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 HORMAD2Q8N7B1 307 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 SLCO2A1Q92959 643 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 MOCOSQ96EN8 888 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 OR4K3Q96R72 315 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 KLHL1Q9NR64 748 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 LANCL2Q9NS86 450 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 ANKRD10Q9NXR5 420 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 SLC17A6Q9P2U8 582 aa16.88■□□□□ 0.29
PRKCSH-211ENST00000590098 CHST10O43529 356 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 MLYCDO95822 493 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 EEF1DP29692 281 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 CD96P40200 585 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 ELK3P41970 407 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 CA7P43166 264 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 OC90Q02509 493 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 ART3Q13508 389 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 USP10Q14694 798 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 MORF4L2Q15014 288 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 OR1C1Q15619 314 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 ZXDCQ2QGD7 858 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 CATSPEREQ5SY80 951 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 STRA8Q7Z7C7 330 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 SRRM1Q8IYB3 904 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 TMEM178AQ8NBL3 297 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 NT5CQ8TCD5 201 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 SLC5A11Q8WWX8 675 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 TSLPQ969D9 159 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 NEIL2Q969S2 332 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 SIGLEC12Q96PQ1 595 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 SH3BGRL2Q9UJC5 107 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 ZFP69BQ9UJL9 534 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms