RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SRFBP1Q8NEF9 429 aaKnown RBP9.97□□□□□ -0.81
VPS25-203ENST00000589520 OR7A2PQ8NGA2 310 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 C16orf78Q8WTQ4 265 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 TFAP2CQ92754 450 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 RGMAQ96B86 450 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 SLC22A18Q96BI1 424 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 SDCCAG3Q96C92 435 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 PYURFQ96I23 114 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 WDR92Q96MX6 357 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 OR2M4Q96R27 311 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 CDX2Q99626 313 aaPredicted RBP9.97□□□□□ -0.81
VPS25-203ENST00000589520 CIB1Q99828 191 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 INPP5KQ9BT40 448 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 ANKRD60Q9BZ19 345 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 TPT1P8Q9HAU6 139 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 OR6C2Q9NZP2 312 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 SH3BP4Q9P0V3 963 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 LIMD1Q9UGP4 676 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 TAC3Q9UHF0 121 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 MMP17Q9ULZ9 603 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 ICKQ9UPZ9 632 aa9.97□□□□□ -0.81
VPS25-203ENST00000589520 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.97□□□□□ -0.81
VPS25-203ENST00000589520 PCYT1BQ9Y5K3 369 aaPredicted RBP9.97□□□□□ -0.81
VPS25-203ENST00000589520 A0A1W2PPV9 198 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 TRBC2A0A5B9 178 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 PRSS38A1L453 326 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 C7orf72A4D263 438 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 ANTXRLA6NF34 631 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 PDZK1P1A8MUH7 402 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 H0YAE9 185 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 CAPN5O15484 640 aaPredicted RBP9.96□□□□□ -0.82
VPS25-203ENST00000589520 DPM1O60762 260 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 GUCY1B2O75343 617 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 FKBP9O95302 570 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 CPSF4O95639 269 aaKnown RBP9.96□□□□□ -0.82
VPS25-203ENST00000589520 KRT75O95678 551 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 IGLV3-19P01714 112 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 FURINP09958 794 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 UBTFL6P0CB48 400 aaPredicted RBP9.96□□□□□ -0.82
VPS25-203ENST00000589520 SHMT2P34897 504 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 AHRP35869 848 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 MAGEA8P43361 318 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 TSFMP43897 325 aaKnown RBP9.96□□□□□ -0.82
VPS25-203ENST00000589520 CCR5P51681 352 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 ARHGDIAP52565 204 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 PLIN5Q00G26 463 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 VAC14Q08AM6 782 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 RPE65Q16518 533 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 NRF1Q16656 503 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 HKDC1Q2TB90 917 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 NHSL2Q5HYW2 709 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 CCNYL2Q5T2Q4 361 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 TRIM40Q6P9F5 258 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 ARMCX6Q7L4S7 300 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 NUDT13Q86X67 352 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 CACUL1Q86Y37 369 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 ZDHHC13Q8IUH4 622 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 RNF175Q8N4F7 328 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 GPR156Q8NFN8 814 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 FAM3CQ92520 227 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 GFM2Q969S9 779 aaKnown RBP9.96□□□□□ -0.82
VPS25-203ENST00000589520 NCLNQ969V3 563 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 SLC47A1Q96FL8 570 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 IL17FQ96PD4 163 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 TRAPPC9Q96Q05 1148 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 SEPHS2Q99611 448 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 SLC29A1Q99808 456 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 TBCDQ9BTW9 1192 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 MS4A8Q9BY19 250 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 YTHDF1Q9BYJ9 559 aaKnown RBP9.96□□□□□ -0.82
VPS25-203ENST00000589520 ASPSCR1Q9BZE9 553 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 TRIM8Q9BZR9 551 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 OR51B5Q9H339 312 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 OSGEPL1Q9H4B0 414 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 IKZF5Q9H5V7 419 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 PIF1Q9H611 641 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 ZNF696Q9H7X3 374 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 CARS2Q9HA77 564 aaKnown RBP9.96□□□□□ -0.82
VPS25-203ENST00000589520 SLC2A4RGQ9NR83 387 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 TM7SF3Q9NS93 570 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 PNPLA3Q9NST1 481 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 TRNAU1APQ9NX07 287 aaKnown RBP9.96□□□□□ -0.82
VPS25-203ENST00000589520 SPASTQ9UBP0 616 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 CIDEBQ9UHD4 219 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 MOSPD1Q9UJG1 213 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 SNX7Q9UNH6 387 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 DMTF1Q9Y222 760 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 WDR37Q9Y2I8 494 aa9.96□□□□□ -0.82
VPS25-203ENST00000589520 ZFC3H1O60293 1989 aaKnown RBP9.95□□□□□ -0.82
VPS25-203ENST00000589520 C1orf226A1L170 272 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 SAC3D1A6NKF1 404 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 OR5K4A6NMS3 321 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 C2CD4DB7Z1M9 353 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 GNGT2O14610 69 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 ACOX3O15254 700 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 SLC31A1O15431 190 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 KCNK5O95279 499 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 IFNA14P01570 189 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 FUCA1P04066 466 aa9.95□□□□□ -0.82
VPS25-203ENST00000589520 GSNP06396 782 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms