RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CDC25BP30305 580 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 RGS4P49798 205 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 OR4D2P58180 307 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 SLC26A5P58743 744 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 OC90Q02509 493 aaPredicted RBP13.15□□□□□ -0.3
VMP1-209ENST00000588915 SP140Q13342 867 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 PWP1Q13610 501 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 ABRAXAS2Q15018 415 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 AGTRAPQ6RW13 159 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 PIWIL4Q7Z3Z4 852 aaKnown RBP13.15□□□□□ -0.3
VMP1-209ENST00000588915 GALNTL5Q7Z4T8 443 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 SLC26A11Q86WA9 606 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 PDSS2Q86YH6 399 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 PALM2Q8IXS6 379 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 CPNE9Q8IYJ1 553 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 AFAP1L2Q8N4X5 818 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 POGLUT1Q8NBL1 392 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 MFSD9Q8NBP5 474 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 ZNF669Q96BR6 464 aaPredicted RBP13.15□□□□□ -0.3
VMP1-209ENST00000588915 TBC1D20Q96BZ9 403 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 TRIM51Q9BSJ1 452 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 HAUS8Q9BT25 410 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 SGPP1Q9BX95 441 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 PARVBQ9HBI1 364 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 FBXO5Q9UKT4 447 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 NPIPA1Q9UND3 350 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 PDE10AQ9Y233 779 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 NAALAD2Q9Y3Q0 740 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 ADGRG4Q8IZF6 3080 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 CCDC168Q8NDH2 2452 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 OR2W5A6NFC9 320 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 PRRG2O14669 202 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 NDC80O14777 642 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 RDH16O75452 317 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 TSPAN12O95859 305 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 FHP07954 510 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 NPPBP16860 134 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 JAK1P23458 1154 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 TRHRP34981 398 aaPredicted RBP13.14□□□□□ -0.31
VMP1-209ENST00000588915 COILP38432 576 aaPredicted RBP13.14□□□□□ -0.31
VMP1-209ENST00000588915 GPS1Q13098 491 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.14□□□□□ -0.31
VMP1-209ENST00000588915 STRA8Q7Z7C7 330 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 DOLPP1Q86YN1 238 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 ARMC10Q8N2F6 343 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 TBC1D19Q8N5T2 526 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 ABHD11Q8NFV4 315 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 OR4K1Q8NGD4 311 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 GABPB2Q8TAK5 448 aaPredicted RBP13.14□□□□□ -0.31
VMP1-209ENST00000588915 ZCCHC10Q8TBK6 192 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 PEX11GQ96HA9 241 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 DMRTA2Q96SC8 542 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 TREX2Q9BQ50 279 aaPredicted RBP13.14□□□□□ -0.31
VMP1-209ENST00000588915 MACROD1Q9BQ69 325 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 AARSD1Q9BTE6 412 aaKnown RBP13.14□□□□□ -0.31
VMP1-209ENST00000588915 HES7Q9BYE0 225 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 CDCP1Q9H5V8 836 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 ANKRD10Q9NXR5 420 aa13.14□□□□□ -0.31
VMP1-209ENST00000588915 TRMT6Q9UJA5 497 aaKnown RBP13.14□□□□□ -0.31
VMP1-209ENST00000588915 SCN3AQ9NY46 2000 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 FEZF1A0PJY2 475 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 C19orf84I3L1E1 186 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 CEP104O60308 925 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 NME2P1O60361 137 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 GALR3O60755 368 aaPredicted RBP13.13□□□□□ -0.31
VMP1-209ENST00000588915 SLC25A12O75746 678 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 HAUS5O94927 633 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 KRT14P02533 472 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 STATHP02808 62 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 HIST1H2AGP0C0S8 130 aaPredicted RBP13.13□□□□□ -0.31
VMP1-209ENST00000588915 ZNF24P17028 368 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 ALOX12P18054 663 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 HIST1H2ADP20671 130 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 NME2P22392 152 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 SLC1A2P43004 574 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 MAGEA3P43357 314 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 KIR3DL1P43629 444 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 CYB561P49447 251 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 CCR8P51685 355 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 NAE1Q13564 534 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 TESK1Q15569 626 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 MAPKAPK3Q16644 382 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 SPNS3Q6ZMD2 512 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 QSOX2Q6ZRP7 698 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 CEP97Q8IW35 865 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 SHISA5Q8N114 240 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 TRIM58Q8NG06 486 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 AGAP11Q8TF27 550 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 CHTF18Q8WVB6 975 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 HIST1H2AHQ96KK5 128 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 SERPINB12Q96P63 405 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 HIST1H2AJQ99878 128 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 FAM167BQ9BTA0 163 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 H2AFJQ9BTM1 129 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 C20orf96Q9NUD7 363 aaPredicted RBP13.13□□□□□ -0.31
VMP1-209ENST00000588915 TAS2R13Q9NYV9 303 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 COQ3Q9NZJ6 369 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 ASB1Q9Y576 335 aa13.13□□□□□ -0.31
VMP1-209ENST00000588915 CACNA1CQ13936 2221 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms