RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 TSFMP43897 325 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 ARSFP54793 590 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 VSX2P58304 361 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 MC2RQ01718 297 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 DDX39BQ13838 428 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 KCNAB1Q14722 419 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 DEFB110Q30KQ9 67 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 FAM214AQ32MH5 1076 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 FRMPD2BQ6IN97 320 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 ABHD13Q7L211 337 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 RAB11FIP2Q7L804 512 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 PPP1R3BQ86XI6 285 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 DDIASQ8IXT1 998 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 ZNF501Q96CX3 271 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 TEFMQ96QE5 360 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 OR6C1Q96RD1 312 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 MTERF1Q99551 399 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 MS4A8Q9BY19 250 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 TRIM55Q9BYV6 548 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 B3GNT4Q9C0J1 378 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 TNFRSF12AQ9NP84 129 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 PNPOQ9NVS9 261 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 VPS29Q9UBQ0 182 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 ADAM21Q9UKJ8 722 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 LOXL2Q9Y4K0 774 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 CFAP54Q96N23 3096 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 GMNCA6NCL1 334 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 LRIT2A6NDA9 550 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 MAGEB17A8MXT2 336 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 TMEM233B4DJY2 109 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 PLD2O14939 933 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 POLR1CO15160 346 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 EIF2S1P05198 315 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 SERPIND1P05546 499 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 HBQ1P09105 142 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 JMJD7P0C870 316 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 FGF5P12034 268 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 ALOX15P16050 662 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 PRPH2P23942 346 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 GYS2P54840 703 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 CYP4F2P78329 520 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 FOXM1Q08050 763 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 ABRAXAS2Q15018 415 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 HERC3Q15034 1050 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 MUM1Q2TAK8 710 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 PRTGQ2VWP7 1150 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 ADPRMQ3LIE5 342 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 SGO1Q5FBB7 561 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 WASHC2DQ5SRD0 308 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 KHDRBS2Q5VWX1 349 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 TRIM40Q6P9F5 258 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 CEACAM20Q6UY09 585 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 ATG14Q6ZNE5 492 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 TMPRSS7Q7RTY8 843 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 VN1R5Q7Z5H4 357 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 BMPERQ8N8U9 685 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 GAL3ST3Q96A11 431 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 MVB12AQ96EY5 273 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 KCNC2Q96PR1 638 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 ASPSCR1Q9BZE9 553 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 SLC6A16Q9GZN6 736 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 ROGDIQ9GZN7 287 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 REXO4Q9GZR2 422 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 MEAF6Q9HAF1 191 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 FGFR1OP2Q9NVK5 253 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 MARCOQ9UEW3 520 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 SLC22A7Q9Y694 548 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 SPEGQ15772 3267 aa16.18■□□□□ 0.18
SCAMP4-211ENST00000588907 LOC105369274A0A096LPK9 316 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 LOC102723532A0A0G2JNH3 316 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 PIP5K1BO14986 540 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 SHOX2O60902 331 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 SKAP2O75563 359 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 KITP10721 976 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 PCSK2P16519 638 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 SERPINB3P29508 390 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 NEK2P51955 445 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 RAP1GDS1P52306 607 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 RPS13P62277 151 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 FAM53BQ14153 422 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 GPR19Q15760 415 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 PDCD2Q16342 344 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 SMU1Q2TAY7 513 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 SPIN4Q56A73 249 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 XKR7Q5GH72 579 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 TCHHL1Q5QJ38 904 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 DCAF12Q5T6F0 453 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 DEPDC1Q5TB30 811 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 TMEM164Q5U3C3 297 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 TMEM214Q6NUQ4 689 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 PAGE2Q7Z2X7 111 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 PARP9Q8IXQ6 854 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 OR4N4Q8N0Y3 316 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 OR2L5Q8NG80 312 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 RGMAQ96B86 450 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 PPP3R2Q96LZ3 170 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 QRFPRQ96P65 431 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 NDC1Q9BTX1 674 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 DDA1Q9BW61 102 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms