RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CD96P40200 585 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PGGT1BP53609 377 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 CDKN2DP55273 166 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 RHAGQ02094 409 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 DHX9Q08211 1270 aaKnown RBP12.9□□□□□ -0.34
HDAC5-208ENST00000588419 SP140Q13342 867 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
HDAC5-208ENST00000588419 USP10Q14694 798 aaKnown RBP12.9□□□□□ -0.34
HDAC5-208ENST00000588419 CRYMQ14894 314 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PPP1R7Q15435 360 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PHKG1Q16816 387 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 DEFB134Q4QY38 66 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PAQR3Q6TCH7 311 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 LCTLQ6UWM7 567 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 RPTNQ6XPR3 784 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 GALNTL5Q7Z4T8 443 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PPIL6Q8IXY8 311 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 KIF2BQ8N4N8 673 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 SLC5A8Q8N695 610 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 GPATCH11Q8N954 259 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 TMEM178AQ8NBL3 297 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 MFSD9Q8NBP5 474 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 FAM98AQ8NCA5 519 aaKnown RBP12.9□□□□□ -0.34
HDAC5-208ENST00000588419 MDS2Q8NDY4 140 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 M1APQ8TC57 530 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 SIGLEC10Q96LC7 697 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 TSNARE1Q96NA8 513 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 NPAS2Q99743 824 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 RHBGQ9H310 441 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 CDCP1Q9H5V8 836 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PPANQ9NQ55 473 aaKnown RBP12.9□□□□□ -0.34
HDAC5-208ENST00000588419 ARL15Q9NXU5 204 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PPP2R2CQ9Y2T4 447 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
HDAC5-208ENST00000588419 EML6Q6ZMW3 1958 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 KCNE1BA0A087WTH5 132 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 PGRMC1O00264 195 aaKnown RBP12.89□□□□□ -0.35
HDAC5-208ENST00000588419 EIF3FO00303 357 aaPredicted RBP12.89□□□□□ -0.35
HDAC5-208ENST00000588419 NDC80O14777 642 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 NRDCO43847 1150 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 MLYCDO95822 493 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 CYC1P08574 325 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 ZNF888P0CJ79 500 aaPredicted RBP12.89□□□□□ -0.35
HDAC5-208ENST00000588419 ABOP16442 354 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 HNF4AP41235 474 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 CCR8P51685 355 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 SLC26A5P58743 744 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 ADORA2A-AS1P86434 159 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 HSF1Q00613 529 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 MAPKAPK3Q16644 382 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.89□□□□□ -0.35
HDAC5-208ENST00000588419 ZNF662Q6ZS27 426 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.89□□□□□ -0.35
HDAC5-208ENST00000588419 NAT8LQ8N9F0 302 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 C2CD4AQ8NCU7 369 aaPredicted RBP12.89□□□□□ -0.35
HDAC5-208ENST00000588419 ZNF740Q8NDX6 193 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 GABPB2Q8TAK5 448 aaPredicted RBP12.89□□□□□ -0.35
HDAC5-208ENST00000588419 GRK7Q8WTQ7 553 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 TM4SF19Q96DZ7 209 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 CFAP36Q96G28 342 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 GPR137Q96N19 417 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 HAUS8Q9BT25 410 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 MMP25Q9NPA2 562 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 CHST11Q9NPF2 352 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 LRFN1Q9P244 771 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 ASIC3Q9UHC3 531 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 ITGB1BP2Q9UKP3 347 aa12.89□□□□□ -0.35
HDAC5-208ENST00000588419 CSMD1Q96PZ7 3565 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 GOLGA6L10A0A0M3HER8 536 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 A8MUA0 341 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 MAGEB17A8MXT2 336 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 DNAJB6O75190 326 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 FHP07954 510 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 JAK1P23458 1154 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 MAGEA3P43357 314 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 SMSP52788 366 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 CCZ1BP86790 482 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 CCZ1P86791 482 aaPredicted RBP12.88□□□□□ -0.35
HDAC5-208ENST00000588419 TIAL1Q01085 375 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDAC5-208ENST00000588419 RGS1Q08116 209 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 HERC3Q15034 1050 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 ZXDCQ2QGD7 858 aaPredicted RBP12.88□□□□□ -0.35
HDAC5-208ENST00000588419 BBS9Q3SYG4 887 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 HP1BP3Q5SSJ5 553 aaPredicted RBP12.88□□□□□ -0.35
HDAC5-208ENST00000588419 CATSPEREQ5SY80 951 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 H3F3CQ6NXT2 135 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 TMPRSS11BQ86T26 416 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 LRRC8AQ8IWT6 810 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 RASGEF1CQ8N431 466 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 TBC1D19Q8N5T2 526 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 TBC1D20Q96BZ9 403 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 SCMH1Q96GD3 660 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 PBKQ96KB5 322 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 FRMD6Q96NE9 622 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 OR1F2PQ96R84 312 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 NAP1L3Q99457 506 aaPredicted RBP12.88□□□□□ -0.35
HDAC5-208ENST00000588419 SGPP1Q9BX95 441 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 TRIM54Q9BYV2 358 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 SPNS1Q9H2V7 528 aa12.88□□□□□ -0.35
HDAC5-208ENST00000588419 LANCL2Q9NS86 450 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms