RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 UNC5DQ6UXZ4 953 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 CENPUQ71F23 418 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 HDXQ7Z353 690 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 CPEB2Q7Z5Q1 589 aaKnown RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 CCDC71Q8IV32 467 aaPredicted RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 ANKMY2Q8IV38 441 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 RAB42Q8N4Z0 105 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 CPSF7Q8N684 471 aaKnown RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 HORMAD2Q8N7B1 307 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 NAT8LQ8N9F0 302 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 LILRB4Q8NHJ6 448 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 FAM57AQ8TBR7 257 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 LKAAEAR1Q8TD35 194 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 SKA2Q8WVK7 121 aaPredicted RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 CAVIN3Q969G5 261 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 CDKN2AIPNLQ96HQ2 116 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 DPH7Q9BTV6 452 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 ACAT2Q9BWD1 397 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 POLDIP3Q9BY77 421 aaKnown RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 TGIF2Q9GZN2 237 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 VN1R1Q9GZP7 353 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 DRC3Q9H069 523 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 TSPYL1Q9H0U9 437 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 LIME1Q9H400 295 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 PIH1D1Q9NWS0 290 aaKnown RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 ST6GALNAC2Q9UJ37 374 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 RUVBL1Q9Y265 456 aaKnown RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 PLEKHA6Q9Y2H5 1048 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 HCFC1P51610 2035 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 SCN2AQ99250 2005 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 A0A1B0GTH9 108 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 OR2A25A4D2G3 310 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 IQCF5A8MTL0 148 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 F8W8V4 182 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 TFECO14948 347 aaPredicted RBP8.06□□□□□ -1.12
SDF2-204ENST00000587338 CDC40O60508 579 aaKnown RBP eCLIP8.06□□□□□ -1.12
SDF2-204ENST00000587338 BANF1O75531 89 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 SLC25A12O75746 678 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 NEURL1O76050 574 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 APOA4P06727 396 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 TPSB2P20231 275 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 DNASE1P24855 282 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 CMPK1P30085 196 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 FOXN2P32314 431 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 RFC3P40938 356 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 MAGEA4P43358 317 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 EMP3P54852 163 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 SESN2P58004 480 aaPredicted RBP8.06□□□□□ -1.12
SDF2-204ENST00000587338 YBX1P67809 324 aaKnown RBP8.06□□□□□ -1.12
SDF2-204ENST00000587338 CASP8Q14790 479 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 TMED2Q15363 201 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 TPSAB1Q15661 275 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 CCSMST1Q4G0I0 132 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 TMEM211Q6ICI0 200 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 SLC25A25Q6KCM7 469 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 H3F3CQ6NXT2 135 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 CASC4Q6P4E1 433 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 LRRC8BQ6P9F7 803 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 CAPN12Q6ZSI9 719 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 BIVMQ86UB2 503 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 PALM2Q8IXS6 379 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 ZBED8Q8IZ13 594 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 PDIK1LQ8N165 341 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 RPRMLQ8N4K4 120 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 SLC5A8Q8N695 610 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 OR2A1Q8NGT9 310 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 UHMK1Q8TAS1 419 aaKnown RBP8.06□□□□□ -1.12
SDF2-204ENST00000587338 GSDMBQ8TAX9 411 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 STYXQ8WUJ0 223 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 ASZ1Q8WWH4 475 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 RND1Q92730 232 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 HDAC10Q969S8 669 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 RERGQ96A58 199 aaPredicted RBP8.06□□□□□ -1.12
SDF2-204ENST00000587338 RMND5BQ96G75 393 aaPredicted RBP8.06□□□□□ -1.12
SDF2-204ENST00000587338 SEC16BQ96JE7 1060 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 PPP1R2P1Q96PQ5 205 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 NPAS2Q99743 824 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 SMR3AQ99954 134 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 TSSK1BQ9BXA7 367 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 SYNPO2LQ9H987 977 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 ARNT2Q9HBZ2 717 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 SLC24A3Q9HC58 644 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 LRFN1Q9P244 771 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 C19orf25Q9UFG5 118 aaPredicted RBP8.06□□□□□ -1.12
SDF2-204ENST00000587338 RUVBL2Q9Y230 463 aaKnown RBP8.06□□□□□ -1.12
SDF2-204ENST00000587338 KLK4Q9Y5K2 254 aa8.06□□□□□ -1.12
SDF2-204ENST00000587338 FBN1P35555 2871 aaKnown RBP8.05□□□□□ -1.12
SDF2-204ENST00000587338 ZANQ9Y493 2812 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 DNAJC13O75165 2243 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 FAM237BA0A1B0GVD1 139 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CCDC162PA2VCL2 907 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 TP73O15350 636 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 FOXS1O43638 330 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 NME2P1O60361 137 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 AVILO75366 819 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 GPC4O75487 556 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CTAG2O75638 210 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 ACSL3O95573 720 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 NME2P22392 152 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 HSD17B3P37058 310 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms