RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 ANKRD10Q9NXR5 420 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 TAS2R13Q9NYV9 303 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 DNAJC13O75165 2243 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 CCL21O00585 134 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 SLC16A5O15375 505 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 NDUFS4O43181 175 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 DNAJB6O75190 326 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 B3GALT4O96024 378 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 SLC35G6P0C7Q6 338 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 NPPBP16860 134 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 CCND1P24385 295 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 GRK3P35626 688 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 ART3Q13508 389 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 ABRAXAS2Q15018 415 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 IGDCC3Q8IVU1 814 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 PALM2Q8IXS6 379 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 AFAP1L2Q8N4X5 818 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 ZNF740Q8NDX6 193 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 PLPP5Q8NEB5 264 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 ABHD11Q8NFV4 315 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 ZNF354BQ96LW1 612 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 OR4K3Q96R72 315 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 NAP1L3Q99457 506 aaPredicted RBP13.18□□□□□ -0.3
ATG4D-206ENST00000586863 PLAC1Q9HBJ0 212 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 MMP25Q9NPA2 562 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 KLHL1Q9NR64 748 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 SUCOQ9UBS9 1254 aaKnown RBP13.18□□□□□ -0.3
ATG4D-206ENST00000586863 SLC22A7Q9Y694 548 aa13.18□□□□□ -0.3
ATG4D-206ENST00000586863 CTAGE15A4D2H0 777 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 AHSGP02765 367 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 MYBL2P10244 700 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 CD96P40200 585 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 CCR8P51685 355 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 OLR1P78380 273 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 USP10Q14694 798 aaKnown RBP13.17□□□□□ -0.3
ATG4D-206ENST00000586863 PPP1R7Q15435 360 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 OR1C1Q15619 314 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 NSDHLQ15738 373 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 EXT1Q16394 746 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 MEP1AQ16819 746 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 SPANXN3Q5MJ09 141 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 SPINK14Q6IE38 97 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 MRGPRGQ86SM5 289 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 CTAGE6Q86UF2 777 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 MCEMP1Q8IX19 187 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 OR4K1Q8NGD4 311 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 OR56A3Q8NH54 315 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 M1APQ8TC57 530 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 ACTRT1Q8TDG2 376 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 GRK7Q8WTQ7 553 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 OR1F2PQ96R84 312 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 OSBPL9Q96SU4 736 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 HAUS8Q9BT25 410 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 SARGQ9BW04 601 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 FAM129AQ9BZQ8 928 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 TSPAN10Q9H1Z9 355 aaPredicted RBP13.17□□□□□ -0.3
ATG4D-206ENST00000586863 SPNS1Q9H2V7 528 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 ARL15Q9NXU5 204 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 PCDHGB6Q9Y5F9 930 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 KLF2Q9Y5W3 355 aaPredicted RBP13.17□□□□□ -0.3
ATG4D-206ENST00000586863 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
ATG4D-206ENST00000586863 C2CD3Q4AC94 2353 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 ANKRD17O75179 2603 aaKnown RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 GABRR3A8MPY1 467 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 MAGEB17A8MXT2 336 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 DNALI1O14645 258 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 OR1F1O43749 312 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 GALR3O60755 368 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 SLC19A2O60779 497 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 TTC4O95801 387 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 FHP07954 510 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 HIST1H2AGP0C0S8 130 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 HIST1H2ADP20671 130 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 ACTN3Q08043 901 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 HERC3Q15034 1050 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 C3AR1Q16581 482 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 DEFB134Q4QY38 66 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 CATSPEREQ5SY80 951 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 DUPD1Q68J44 220 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 KIAA0408Q6ZU52 694 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 KIF2BQ8N4N8 673 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 ZNF808Q8N4W9 903 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 GPATCH11Q8N954 259 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 TBC1D20Q96BZ9 403 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 CERS2Q96G23 380 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 SCMH1Q96GD3 660 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 SNF8Q96H20 258 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 HIST1H2AHQ96KK5 128 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 LPAR4Q99677 370 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 OLFM1Q99784 485 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 HIST1H2AJQ99878 128 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 UTP23Q9BRU9 249 aaKnown RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 WDR83Q9BRX9 315 aaKnown RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 H2AFJQ9BTM1 129 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 DDX47Q9H0S4 455 aaKnown RBP13.16□□□□□ -0.3
ATG4D-206ENST00000586863 ASIC3Q9UHC3 531 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 TINAGQ9UJW2 476 aa13.16□□□□□ -0.3
ATG4D-206ENST00000586863 IKZF3Q9UKT9 509 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms