RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TRIM46Q7Z4K8 759 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 MTERF4Q7Z6M4 381 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 ARHGEF39Q8N4T4 335 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 CMTM7Q96FZ5 175 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 ZNF317Q96PQ6 595 aaPredicted RBP16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 TUBB1Q9H4B7 451 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 VTI1BQ9UEU0 232 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 RARRES3Q9UL19 164 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 FIS1Q9Y3D6 152 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 DCHS1Q96JQ0 3298 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 A0A1W2PNU3 283 aaPredicted RBP16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 EIF2S1P05198 315 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 CTSBP07858 339 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 GCGRP47871 477 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 RPS13P62277 151 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 FOXM1Q08050 763 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 CUL3Q13618 768 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 GRM7Q14831 915 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 HKDC1Q2TB90 917 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 TUBB8Q3ZCM7 444 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 GPR135Q8IZ08 494 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 PFDN4Q9NQP4 134 aa16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 RUVBL1Q9Y265 456 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-203ENST00000586486 LRIT2A6NDA9 550 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 URADA6NGE7 173 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 NPIPB8E9PQR5 432 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 POLR1CO15160 346 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 HDAC3O15379 428 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SEMA3DO95025 777 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 JMJD7P0C870 316 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 PTX3P26022 381 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 LSP1P33241 339 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 ARFIP1P53367 373 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 STXBP1P61764 594 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 TMEM35AQ53FP2 167 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SGO1Q5FBB7 561 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 XKR7Q5GH72 579 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 YOD1Q5VVQ6 348 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 GARNL3Q5VVW2 1013 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 KHDRBS2Q5VWX1 349 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 TMEM214Q6NUQ4 689 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 PPP1R3BQ86XI6 285 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 RNF175Q8N4F7 328 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 CCT6BQ92526 530 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 MTFMTQ96DP5 389 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 HBEGFQ99075 208 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SERPINI1Q99574 410 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 ACPTQ9BZG2 426 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SPRTNQ9H040 489 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 MARCOQ9UEW3 520 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 CCL27Q9Y4X3 112 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 PCDHGA8Q9Y5G5 932 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 FAM149AA5PLN7 773 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 AGRPO00253 132 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 PIP5K1BO14986 540 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 TGDSO95455 350 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SERPIND1P05546 499 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 ALOX15P16050 662 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 ITIH1P19827 911 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 HNRNPH1P31943 449 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 BTKQ06187 659 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 DEPDC1Q5TB30 811 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 CHSY3Q70JA7 882 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 WDR75Q8IWA0 830 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 TTC29Q8NA56 475 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 GAL3ST3Q96A11 431 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 MS4A6EQ96DS6 147 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 C19orf60Q96EN9 201 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 CHMP6Q96FZ7 201 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 TEFMQ96QE5 360 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 ZPBPQ9BS86 351 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 DDA1Q9BW61 102 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 B3GNT4Q9C0J1 378 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 AICDAQ9GZX7 198 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 APMAPQ9HDC9 416 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 NMRK1Q9NWW6 199 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 IRAK4Q9NWZ3 460 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SLC39A1Q9NY26 324 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SRPK3Q9UPE1 567 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 PCDHB3Q9Y5E6 796 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 PCDHGA3Q9Y5H0 932 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SLC22A7Q9Y694 548 aa16.16■□□□□ 0.18
PRKCSH-203ENST00000586486 SLC28A1O00337 649 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 SKAP2O75563 359 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 ETHE1O95571 254 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 TGFB1P01137 390 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 STATHP02808 62 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 JUNP05412 331 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 VIMP08670 466 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 KITP10721 976 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 PRPH2P23942 346 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 ETV5P41161 510 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 GNGT1P63211 74 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 PDCD2Q16342 344 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 FAM214AQ32MH5 1076 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 C3orf38Q5JPI3 329 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 TOR1AIP1Q5JTV8 583 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 CEACAM20Q6UY09 585 aa16.15■□□□□ 0.18
PRKCSH-203ENST00000586486 DDIASQ8IXT1 998 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms