RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SLC5A8Q8N695 610 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 THAP11Q96EK4 314 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 PEX11GQ96HA9 241 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 LPAR4Q99677 370 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 GPR21Q99679 349 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 OLFM1Q99784 485 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 FBXO6Q9NRD1 293 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-225ENST00000586385 ADAMTS6Q9UKP5 1117 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 DRG1Q9Y295 367 aaKnown RBP11.15□□□□□ -0.62
BRCA1-225ENST00000586385 DHRS7Q9Y394 339 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 NAALAD2Q9Y3Q0 740 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 ZCWPW2A0A1B0GU75 182 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 CTAGE15A4D2H0 777 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 E5RI56 91 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 NDC80O14777 642 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 TPSB2P20231 275 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 RFC3P40938 356 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 MLF1P58340 268 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 OLR1P78380 273 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 CTBP1Q13363 440 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 TPSAB1Q15661 275 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 MAPKAPK3Q16644 382 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 THEMIS2Q5TEJ8 643 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 ANKRD22Q5VYY1 191 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 ZNF470Q6ECI4 717 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 ASPGQ86U10 573 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 CTAGE6Q86UF2 777 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 ARMC10Q8N2F6 343 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 CAMKVQ8NCB2 501 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 ZNF740Q8NDX6 193 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 NFAM1Q8NET5 270 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-225ENST00000586385 CHTF18Q8WVB6 975 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 KCNJ9Q92806 393 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 OR1F2PQ96R84 312 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 BAG1Q99933 345 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-225ENST00000586385 SGPP1Q9BX95 441 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 ANKHQ9HCJ1 492 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 CCDC177Q9NQR7 707 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-225ENST00000586385 INTS10Q9NVR2 710 aaKnown RBP11.14□□□□□ -0.63
BRCA1-225ENST00000586385 TNFRSF10DQ9UBN6 386 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 PPT2Q9UMR5 302 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 PDE10AQ9Y233 779 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 SLC22A7Q9Y694 548 aa11.14□□□□□ -0.63
BRCA1-225ENST00000586385 IGKV3D-11A0A0A0MRZ8 115 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 A0A1B0GTH9 108 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 CHST10O43529 356 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 GALR3O60755 368 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-225ENST00000586385 DIAPH2O60879 1101 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 TOXO94900 526 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 MLYCDO95822 493 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 TSPAN12O95859 305 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 CDH1P12830 882 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 ENO3P13929 434 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-225ENST00000586385 PTMSP20962 102 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 HRH2P25021 359 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 TRHRP34981 398 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-225ENST00000586385 SLC1A2P43004 574 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 MAGEA6P43360 314 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 ITGA8P53708 1063 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 TERF1P54274 439 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 OR4D2P58180 307 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 BTG2P78543 158 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 MPP1Q00013 466 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 CDK16Q00536 496 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 ACTN3Q08043 901 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-225ENST00000586385 GTF3C1Q12789 2109 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 TTLL9Q3SXZ7 439 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 CMPK2Q5EBM0 449 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 EMC4Q5J8M3 183 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 CAPN13Q6MZZ7 669 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-225ENST00000586385 UBE2R2Q712K3 238 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-225ENST00000586385 CD163Q86VB7 1156 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 MFSD9Q8NBP5 474 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 FAM57AQ8TBR7 257 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 MCOLN3Q8TDD5 553 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 CA5BP1Q8WTZ4 195 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 SLC13A3Q8WWT9 602 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 NRGNQ92686 78 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 UCK2Q9BZX2 261 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 ATG10Q9H0Y0 220 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 SPNS1Q9H2V7 528 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 SCN3AQ9NY46 2000 aa11.13□□□□□ -0.63
BRCA1-225ENST00000586385 NKX2-6A6NCS4 301 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 C4orf51C9J302 202 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 AP3B1O00203 1094 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 PRRG2O14669 202 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 ZBTB14O43829 449 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 FHP07954 510 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 NPPBP16860 134 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 IL10P22301 178 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 MEOX1P50221 254 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 HLCSP50747 726 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 TAS2R50P59544 299 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 MEF2AQ02078 507 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-225ENST00000586385 DHX34Q14147 1143 aaKnown RBP11.12□□□□□ -0.63
BRCA1-225ENST00000586385 TRIP13Q15645 432 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-225ENST00000586385 PHKG1Q16816 387 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 DEFB134Q4QY38 66 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 MEI1Q5TIA1 1274 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 AGTRAPQ6RW13 159 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms