RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 A0A1W2PPV9 198 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 FEZF1A0PJY2 475 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ANKRD65E5RJM6 399 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CAPN5O15484 640 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 GDF9O60383 454 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 DNAJA2O60884 412 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 UBXN7O94888 489 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 TGFB1P01137 390 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 WNT1P04628 370 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 PROS1P07225 676 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 BCKDHAP12694 445 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 SDC1P18827 310 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CD22P20273 847 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 MAGP20916 626 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 EPHA8P29322 1005 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 KIR3DL1P43629 444 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CAPZBP47756 277 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 MAPK12P53778 367 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 DIO3P55073 304 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CLDN8P56748 225 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 UBE2IP63279 158 aaKnown RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 GPLD1P80108 840 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 SLC25A3Q00325 362 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CYP4F3Q08477 520 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 DMWDQ09019 674 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 PTGR1Q14914 329 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 PGS1Q32NB8 556 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 FAM174BQ3ZCQ3 159 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 SPATS1Q496A3 300 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 AASDHQ4L235 1098 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 RFTN2Q52LD8 501 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 TOR1AIP1Q5JTV8 583 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 SAMD4BQ5PRF9 694 aaKnown RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 CCNYL2Q5T2Q4 361 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ANXA8L1Q5VT79 327 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 IRGCQ6NXR0 463 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CYB5D1Q6P9G0 228 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 RINLQ6ZS11 566 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ASRGL1Q7L266 308 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 COMMD6Q7Z4G1 85 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ASPGQ86U10 573 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 FAM129CQ86XR2 697 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 TRIML2Q8N7C3 387 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 OR9I1Q8NGQ6 314 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CLHC1Q8NHS4 586 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 SLC13A3Q8WWT9 602 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 JPH3Q8WXH2 748 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 GAL3ST3Q96A11 431 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ZUFSPQ96AP4 578 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 TESCQ96BS2 214 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ZNF775Q96BV0 537 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 PPCDCQ96CD2 204 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 SLC7A6OSQ96CW6 309 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 MTERF3Q96E29 417 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ZDHHC12Q96GR4 267 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ITCHQ96J02 903 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 LRGUKQ96M69 825 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 GBP5Q96PP8 586 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 KCNC2Q96PR1 638 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 OR52E6Q96RD3 313 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CD180Q99467 661 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 NPAS2Q99743 824 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 HOPXQ9BPY8 73 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 ZFYVE21Q9BQ24 234 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 ORAI3Q9BRQ5 295 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 MENTQ9BUN1 341 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 MS4A8Q9BY19 250 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 REXO4Q9GZR2 422 aaKnown RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 KCNH6Q9H252 994 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 RASSF4Q9H2L5 321 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 RHBGQ9H310 441 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 MUC13Q9H3R2 512 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 FANCEQ9HB96 536 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 CD320Q9NPF0 282 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 FAM120CQ9NX05 1096 aaKnown RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 LYARQ9NX58 379 aaKnown RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 TAS2R1Q9NYW7 299 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 NLGN3Q9NZ94 848 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 ADAM29Q9UKF5 820 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 SH2B3Q9UQQ2 575 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 WBP11Q9Y2W2 641 aaKnown RBP5.93□□□□□ -1.46
LIG3-206ENST00000586058 ST14Q9Y5Y6 855 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 AP1M2Q9Y6Q5 423 aa5.93□□□□□ -1.46
LIG3-206ENST00000586058 TLCD2A6NGC4 264 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 EVPLLA8MZ36 301 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 TRIM38O00635 465 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 RFXANKO14593 260 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 HAT1O14929 419 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SCAMP2O15127 329 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 YY2O15391 372 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 GSC2O15499 205 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ZSCAN9O15535 394 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 ERI3O43414 337 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 NUDT21O43809 227 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 SH3BP5O60239 455 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SH3BGRLO75368 114 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 RASSF9O75901 435 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 EPN2O95208 641 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 LRATO95237 230 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms