RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CTIFO43310 598 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 GLRA3O75311 464 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 RFPL1O75677 317 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 CTSBP07858 339 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 GLRBP48167 497 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 ARFIP1P53367 373 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 AP2B1P63010 937 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 NFKB2Q00653 900 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 SLBPQ14493 270 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 SLC9A5Q14940 896 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 XKR6Q5GH73 641 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 LIPJQ5W064 366 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 LCN10Q6JVE6 187 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 PLD3Q8IV08 490 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 CYP4X1Q8N118 509 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 STT3BQ8TCJ2 826 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 EXT2Q93063 718 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 GAL3ST3Q96A11 431 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 CCDC126Q96EE4 140 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 MMABQ96EY8 250 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 ROGDIQ9GZN7 287 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 RHBGQ9H310 441 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 SLC22A11Q9NSA0 550 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 ZNF358Q9NW07 568 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 PLAAQ9Y263 795 aa13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 PCDHGA9Q9Y5G4 932 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-202ENST00000585540 ZFHX4Q86UP3 3567 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 A0A1W2PQ72 361 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 CCDC151A5D8V7 595 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 FOXS1O43638 330 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 LCMT2O60294 686 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 ZGLP1P0C6A0 271 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 ALOX12P18054 663 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 JAK1P23458 1154 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 GDF5P43026 501 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 TSFMP43897 325 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 KCNC1P48547 511 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 POLE2P56282 527 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 RPS18P62269 152 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 IL10RAQ13651 578 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 RCN2Q14257 317 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 RBBP5Q15291 538 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 PFKFB4Q16877 469 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 DEFB109BQ30KR1 87 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 C18orf21Q32NC0 220 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 GRHL2Q6ISB3 625 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 CROCCP2Q86T23 111 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 SLC22A9Q8IVM8 553 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 SLC39A7Q92504 469 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 EXTL1Q92935 676 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 NPLQ9BXD5 320 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 C1QTNF3Q9BXJ4 246 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 ACSS2Q9NR19 701 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 C19orf25Q9UFG5 118 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 PCDHGA11Q9Y5H2 935 aa13.11□□□□□ -0.31
PRKCSH-202ENST00000585540 A0A1W2PPM1 405 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 TLDC2A0PJX2 215 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 H3BQF6 201 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 GOLGA8RI6L899 631 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 ERLIN1O75477 346 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 WFS1O76024 890 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 OR1D4P47884 311 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 CCT5P48643 541 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 CHIT1Q13231 466 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 KCNAB2Q13303 367 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 GTF2H2Q13888 395 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 ADPRMQ3LIE5 342 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 LINC00303Q3SY05 128 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 FBXO48Q5FWF7 155 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 BEND6Q5SZJ8 279 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 GTF2H2CQ6P1K8 395 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 MED27Q6P2C8 311 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 LAS2Q8IYD9 372 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 AMER3Q8N944 861 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 ANKRD53Q8N9V6 530 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 CLEC1AQ8NC01 280 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 MYRIPQ8NFW9 859 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 CREB3L4Q8TEY5 395 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 ZBTB9Q96C00 473 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 RUFY1Q96T51 708 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 CENPKQ9BS16 269 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 CRB3Q9BUF7 120 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 NTMT1Q9BV86 223 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 PSD3Q9NYI0 1048 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 CPSF2Q9P2I0 782 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 TRPC4Q9UBN4 977 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 PPT2Q9UMR5 302 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 NUP210LQ5VU65 1888 aa13.1□□□□□ -0.31
PRKCSH-202ENST00000585540 CACNA1GO43497 2377 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 A0A0A6YYC8 382 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 I3L1I5 382 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 AGPSO00116 658 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 E2F3O00716 465 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 GALR3O60755 368 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 KLHL18O94889 574 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 UMODP07911 640 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms