RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 TMEM178AQ8NBL3 297 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 OR4K1Q8NGD4 311 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 MAGED4Q96JG8 741 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 OR1F2PQ96R84 312 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 LPAR4Q99677 370 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 SGPP1Q9BX95 441 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 ENKD1Q9H0I2 346 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 TSPAN10Q9H1Z9 355 aaPredicted RBP13.6□□□□□ -0.23
SDF2-202ENST00000585428 CDCP1Q9H5V8 836 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 ADAMTS6Q9UKP5 1117 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 PDE10AQ9Y233 779 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 NAALAD2Q9Y3Q0 740 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 ASB1Q9Y576 335 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 E9PLN8 166 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 ZNHIT1O43257 154 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 RDH16O75452 317 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 SLC26A5P58743 744 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 TBPL1P62380 186 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 GPS1Q13098 491 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 THOC5Q13769 683 aaKnown RBP13.59□□□□□ -0.23
SDF2-202ENST00000585428 AGTRAPQ6RW13 159 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 NCCRP1Q6ZVX7 275 aaPredicted RBP13.59□□□□□ -0.23
SDF2-202ENST00000585428 FGD2Q7Z6J4 655 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 ASPGQ86U10 573 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 RPS19BP1Q86WX3 136 aaKnown RBP13.59□□□□□ -0.23
SDF2-202ENST00000585428 LMNTD2Q8IXW0 634 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 AGGF1Q8N302 714 aaeCLIP13.59□□□□□ -0.23
SDF2-202ENST00000585428 MFSD9Q8NBP5 474 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 MCUQ8NE86 351 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 ABHD11Q8NFV4 315 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 OR5T3Q8NGG3 340 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 AGAP11Q8TF27 550 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 PHF10Q8WUB8 498 aaKnown RBP13.59□□□□□ -0.23
SDF2-202ENST00000585428 EEF1AKMT1Q8WVE0 214 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 PEX11GQ96HA9 241 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 DMRTA2Q96SC8 542 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 OLFM1Q99784 485 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 TREX2Q9BQ50 279 aaPredicted RBP13.59□□□□□ -0.23
SDF2-202ENST00000585428 VKORC1Q9BQB6 163 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 AARSD1Q9BTE6 412 aaKnown RBP13.59□□□□□ -0.23
SDF2-202ENST00000585428 ATG10Q9H0Y0 220 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 CCDC68Q9H2F9 335 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 PARVBQ9HBI1 364 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 SAMD15Q9P1V8 674 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 LRFN1Q9P244 771 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 ITGB1BP2Q9UKP3 347 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 FBXO5Q9UKT4 447 aa13.59□□□□□ -0.23
SDF2-202ENST00000585428 ANKRD17O75179 2603 aaKnown RBP13.59□□□□□ -0.23
SDF2-202ENST00000585428 NDC80O14777 642 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 CDC123O75794 336 aaPredicted RBP13.58□□□□□ -0.24
SDF2-202ENST00000585428 SLC1A2P43004 574 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 MAGEA3P43357 314 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 TERF1P54274 439 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 OR4D2P58180 307 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 OC90Q02509 493 aaPredicted RBP13.58□□□□□ -0.24
SDF2-202ENST00000585428 NAE1Q13564 534 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 HERC3Q15034 1050 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 MAPKAPK3Q16644 382 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 LCTLQ6UWM7 567 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 ZNF662Q6ZS27 426 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 C17orf64Q86WR6 236 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 ARMC10Q8N2F6 343 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 GHDCQ8N2G8 530 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 ZCCHC10Q8TBK6 192 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 TSLPQ969D9 159 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 ZNF669Q96BR6 464 aaPredicted RBP13.58□□□□□ -0.24
SDF2-202ENST00000585428 TBC1D20Q96BZ9 403 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 SIGLEC10Q96LC7 697 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 HEATR5BQ9P2D3 2071 aa13.58□□□□□ -0.24
SDF2-202ENST00000585428 SLC16A5O15375 505 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 CHST10O43529 356 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 NME2P1O60361 137 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 GALR3O60755 368 aaPredicted RBP13.57□□□□□ -0.24
SDF2-202ENST00000585428 C8GP07360 202 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 FHP07954 510 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 CDH1P12830 882 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 NME2P22392 152 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 CCND1P24385 295 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 TPP2P29144 1249 aaPredicted RBP13.57□□□□□ -0.24
SDF2-202ENST00000585428 CDC25BP30305 580 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 TRHRP34981 398 aaPredicted RBP13.57□□□□□ -0.24
SDF2-202ENST00000585428 GRK3P35626 688 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 MLF1P58340 268 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 TAS2R50P59544 299 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 HSF1Q00613 529 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 PWP1Q13610 501 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 SPNS3Q6ZMD2 512 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 MBOAT1Q6ZNC8 495 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 CEP97Q8IW35 865 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 KIF2BQ8N4N8 673 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 FAM98AQ8NCA5 519 aaKnown RBP13.57□□□□□ -0.24
SDF2-202ENST00000585428 ZNF740Q8NDX6 193 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 NFAM1Q8NET5 270 aaPredicted RBP13.57□□□□□ -0.24
SDF2-202ENST00000585428 CALML6Q8TD86 181 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 SERPINB12Q96P63 405 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 C20orf96Q9NUD7 363 aaPredicted RBP13.57□□□□□ -0.24
SDF2-202ENST00000585428 NEU2Q9Y3R4 380 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 HRH3Q9Y5N1 445 aa13.57□□□□□ -0.24
SDF2-202ENST00000585428 HIVEP1P15822 2718 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms