RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TMEM184CQ9NVA4 438 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 CIDEBQ9UHD4 219 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 MAN2B2Q9Y2E5 1009 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 PCDHA9Q9Y5H5 950 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 CABIN1Q9Y6J0 2220 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 SPTY2D1-AS1A0A0U1RR47 76 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 METTL12A8MUP2 240 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 FXYD1O00168 92 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 ACOT8O14734 319 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 KRT36O76013 467 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 CDH1P12830 882 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 F3P13726 295 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 ANPEPP15144 967 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 SDC1P18827 310 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 XRCC1P18887 633 aaPredicted RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 GRK3P35626 688 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 TRPC1P48995 793 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 SLC7A2P52569 658 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 ARFIP1P53367 373 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 RPS13P62277 151 aaKnown RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 SIM1P81133 766 aaPredicted RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 REEP5Q00765 189 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 DDX39BQ13838 428 aaKnown RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 CCNIQ14094 377 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 PTGR1Q14914 329 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 ALG11Q2TAA5 492 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 FAM174BQ3ZCQ3 159 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 TIGD2Q4W5G0 525 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 PAGE3Q5JUK9 113 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 ANXA8L1Q5VT79 327 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 ICE2Q659A1 982 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 DLEU7Q6UYE1 221 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 PAGE2Q7Z2X7 111 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 R3HCC1LQ7Z5L2 792 aaKnown RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 DHDDSQ86SQ9 333 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 GPR180Q86V85 440 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 IQCHQ86VS3 1027 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 DHFR2Q86XF0 187 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 TMEM126BQ8IUX1 230 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 RBM12BQ8IXT5 1001 aaKnown RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 METTL4Q8N3J2 472 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 NATD1Q8N6N6 113 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 AVL9Q8NBF6 648 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 OR8J2Q8NGG1 315 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 OR52E1Q8NGJ3 308 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 GPBAR1Q8TDU6 330 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 TMEM125Q96AQ2 219 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 BIRC7Q96CA5 298 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 KLHDC7BQ96G42 594 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 DUS3LQ96G46 650 aaKnown RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 LRGUKQ96M69 825 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 TMEM74Q96NL1 305 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 IL17FQ96PD4 163 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 CGREF1Q99674 301 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 CENPKQ9BS16 269 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 EFHD1Q9BUP0 239 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 VCX3BQ9H321 246 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 GPR27Q9NS67 375 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 DNAAF2Q9NVR5 837 aaKnown RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 NKX1-2Q9UD57 310 aaPredicted RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 TAC3Q9UHF0 121 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 KLK13Q9UKR3 277 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 PLAGL1Q9UM63 463 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 SNX7Q9UNH6 387 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 DLGAP4Q9Y2H0 992 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 PLEKHM1Q9Y4G2 1056 aa9.97□□□□□ -0.81
LIG3-203ENST00000585370 CFAP20Q9Y6A4 193 aaKnown RBP9.97□□□□□ -0.81
LIG3-203ENST00000585370 ITPR1Q14643 2758 aa9.96□□□□□ -0.81
LIG3-203ENST00000585370 A0A096LPI6 279 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 KIR2DS5A0A0G2JLQ3 304 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 A0A0G2JNG1 304 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 A0A1W2PPV9 198 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 TRBC2A0A5B9 178 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 FAM221BA6H8Z2 402 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 ASPDHA6ND91 283 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 AQP12BA6NM10 295 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 H0Y3Z8 333 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 KIR2DS3K7RE56 304 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 PRICKLE3O43900 615 aaPredicted RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 CLEC3AO75596 197 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 SYPP08247 313 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 ANXA4P09525 319 aaPredicted RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 CD27P26842 260 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 HTR1EP28566 365 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 CMPK1P30085 196 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 TIA1P31483 386 aaKnown RBP eCLIP9.96□□□□□ -0.82
LIG3-203ENST00000585370 HPCAL1P37235 193 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 VHLP40337 213 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 ACTR1BP42025 376 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 KIR3DL1P43629 444 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 ACTR1AP61163 376 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 MS4A2Q01362 244 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 KIR2DS5Q14953 304 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 RBBP5Q15291 538 aaKnown RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 DEPDC1Q5TB30 811 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 NANOGP8Q6NSW7 305 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 IYDQ6PHW0 289 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 SLC2A7Q6PXP3 512 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 RD3Q7Z3Z2 195 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 CAMKMTQ7Z624 323 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms