RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CMTM8Q8IZV2 173 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CHTF18Q8WVB6 975 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ATL1Q8WXF7 558 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PROX1Q92786 737 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SCAMP4Q969E2 229 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HERC2P3Q9BVR0 1158 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ZNF451Q9Y4E5 1061 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TESMINQ9Y4I5 508 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TMEM202A6NGA9 273 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RNASET2O00584 256 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CDK1P06493 297 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SLC19A1P41440 591 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CTSKP43235 329 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GSSP48637 474 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TMED10P49755 219 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TIGD6Q17RP2 521 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CCDC103Q8IW40 242 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CACTIN-AS1Q8N1I8 211 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SLC5A8Q8N695 610 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GGHQ92820 318 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DHRS1Q96LJ7 313 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 STOX2Q9P2F5 926 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SPASTQ9UBP0 616 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ZNF282Q9UDV7 671 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ISPDA4D126 451 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TRIM43BA6NCK2 446 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MGAT4DA6NG13 374 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 METTL15A6NJ78 407 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 OR2AG2A6NM03 316 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 UPK1BO75841 260 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MVDP53602 400 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 POLR2LP62875 67 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LRRC74AQ0VAA2 488 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MAPK11Q15759 364 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SPIN4Q56A73 249 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TUBA3EQ6PEY2 450 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DSG4Q86SJ6 1040 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 KLHDC8AQ8IYD2 350 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 OR7G3Q8NG95 312 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AUTS2Q8WXX7 1259 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MRPS31Q92665 395 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MED8Q96G25 268 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TMEM169Q96HH4 297 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ABHD8Q96I13 439 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 FAM83DQ9H4H8 585 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AMBNQ9NP70 447 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 POLE4Q9NR33 117 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GPATCH2Q9NW75 528 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 A3GALT2U3KPV4 340 aa13.66□□□□□ -0.22
CDK5RAP3-237ENST00000585163 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TAF4O00268 1085 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 KDM1AO60341 852 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SH3BGRLO75368 114 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HLA-EP13747 358 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ANXA8P13928 327 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ZNF30P17039 623 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GADD45AP24522 165 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CDC20Q12834 499 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 USP43Q70EL4 1123 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SLC46A3Q7Z3Q1 461 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CHST14Q8NCH0 376 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LSM14AQ8ND56 463 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 OR10G2Q8NGC3 310 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 OR4A15Q8NGL6 344 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 OR4C15Q8NGM1 316 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 FAM83CQ9BQN1 747 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SP140LQ9H930 580 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SH3BP4Q9P0V3 963 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 FAM8A1Q9UBU6 413 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RAPGEFL1Q9UHV5 662 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SLCO3A1Q9UIG8 710 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 EXO1Q9UQ84 846 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PCDHGA2Q9Y5H1 932 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AGAP5A6NIR3 686 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CXCL10P02778 98 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PTX3P26022 381 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TIA1P31483 386 aaKnown RBP eCLIP13.65□□□□□ -0.222e-8■■□□□ 11.4
CDK5RAP3-237ENST00000585163 DCDC1P59894 354 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TEKQ02763 1124 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CCSMST1Q4G0I0 132 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CCDC80Q76M96 950 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HSD11B1LQ7Z5J1 315 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ARMC8Q8IUR7 673 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LYSMD2Q8IV50 215 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GOT1L1Q8NHS2 421 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RAET1EQ8TD07 263 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HPS1Q92902 700 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RAD9AQ99638 391 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HEPHQ9BQS7 1158 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TRPV5Q9NQA5 729 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RLIMQ9NVW2 624 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ANKMY1Q9P2S6 941 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SLC25A13Q9UJS0 675 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 POFUT2Q9Y2G5 429 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms