RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 OCIAD1Q9NX40 245 aa10.98□□□□□ -0.65
GGA3-211ENST00000582232 SERTAD3Q9UJW9 196 aa10.98□□□□□ -0.65
GGA3-211ENST00000582232 CCL27Q9Y4X3 112 aa10.98□□□□□ -0.65
GGA3-211ENST00000582232 SEC16AO15027 2179 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 CCDC187A0A096LP49 1063 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 DCDC2BA2VCK2 349 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 GMNCA6NCL1 334 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 LRIT2A6NDA9 550 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 URADA6NGE7 173 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 TRPC5OSA6NMA1 111 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 TMEM150CB9EJG8 249 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 SLC28A1O00337 649 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 PIP5K1BO14986 540 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 P2RX6O15547 441 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 NDUFS4O43181 175 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 SEMA3DO95025 777 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 SMIM10L1P0DMW3 83 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 FGF5P12034 268 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 TSFMP43897 325 aaKnown RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 ITGA1P56199 1179 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 STXBP1P61764 594 aaKnown RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 RPS13P62277 151 aaKnown RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 GNGT1P63211 74 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 BTKQ06187 659 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 RGS1Q08116 209 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 TUBB3Q13509 450 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 GPR19Q15760 415 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 DEFB110Q30KQ9 67 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 TMEM35AQ53FP2 167 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 DEPDC1Q5TB30 811 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 YOD1Q5VVQ6 348 aaPredicted RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 GARNL3Q5VVW2 1013 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 KHDRBS2Q5VWX1 349 aaKnown RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 TMEM214Q6NUQ4 689 aaKnown RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 TLDC1Q6P9B6 456 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 Q6ZSR9 355 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 CHSY3Q70JA7 882 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 RAB11FIP2Q7L804 512 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 TMPRSS7Q7RTY8 843 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 CSNK1A1LQ8N752 337 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 SRFBP1Q8NEF9 429 aaKnown RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 OR1L3Q8NH93 324 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 N4BP2L2Q92802 583 aaPredicted RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 MTFMTQ96DP5 389 aaKnown RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 SMIM10Q96HG1 83 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 MAELQ96JY0 434 aaKnown RBP10.97□□□□□ -0.65
GGA3-211ENST00000582232 OR6C1Q96RD1 312 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 SERPINI1Q99574 410 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 ACPTQ9BZG2 426 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 B3GNT4Q9C0J1 378 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 MEAF6Q9HAF1 191 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 FGFR1OP2Q9NVK5 253 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 SIRT5Q9NXA8 310 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 FIS1Q9Y3D6 152 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 SLC22A7Q9Y694 548 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 USH1CQ9Y6N9 552 aa10.97□□□□□ -0.65
GGA3-211ENST00000582232 EFCAB7A8K855 629 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 RGS14O43566 566 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 VPS4BO75351 444 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 OR2B3O76000 313 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 RSL1D1O76021 490 aaKnown RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 ETHE1O95571 254 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 TGFB1P01137 390 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 JUNP05412 331 aaKnown RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 CTSBP07858 339 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 KITP10721 976 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 HNRNPH1P31943 449 aaKnown RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 CLDN6P56747 220 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 RAB15P59190 212 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 CYP4F2P78329 520 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 DDX39BQ13838 428 aaKnown RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 FAM53BQ14153 422 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 PUM1Q14671 1186 aaKnown RBP eCLIP10.96□□□□□ -0.65
GGA3-211ENST00000582232 GRM7Q14831 915 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 SMU1Q2TAY7 513 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 HKDC1Q2TB90 917 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 FAM214AQ32MH5 1076 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.96□□□□□ -0.65
GGA3-211ENST00000582232 SGO1Q5FBB7 561 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 FAM219BQ5XKK7 198 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 EPGNQ6UW88 154 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 MAVSQ7Z434 540 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 GPR135Q8IZ08 494 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 RNF175Q8N4F7 328 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 OR2L5Q8NG80 312 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 WDR36Q8NI36 951 aaKnown RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 CCT6BQ92526 530 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 MS4A6EQ96DS6 147 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 C19orf60Q96EN9 201 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 C11orf24Q96F05 449 aaPredicted RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 ZPBPQ9BS86 351 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 TRIM55Q9BYV6 548 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 REXO4Q9GZR2 422 aaKnown RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 AICDAQ9GZX7 198 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 SPRTNQ9H040 489 aaPredicted RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 EPN3Q9H201 632 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 VPS29Q9UBQ0 182 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 MARCOQ9UEW3 520 aaPredicted RBP10.96□□□□□ -0.65
GGA3-211ENST00000582232 RARRES3Q9UL19 164 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 RUVBL1Q9Y265 456 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms