RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 RBMS1P29558 406 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 GGT5P36269 586 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 MC2RQ01718 297 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 CLCQ05315 142 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 PCBP2Q15366 365 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 PDCD2Q16342 344 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 PTCHD3Q3KNS1 767 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 UNC50Q53HI1 259 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 C6orf163Q5TEZ5 329 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 LRRC70Q7Z2Q7 622 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 PRICKLE2Q7Z3G6 844 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 BPHLQ86WA6 291 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 OR8K5Q8NH50 307 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 ZNF483Q8TF39 744 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 UBTD2Q8WUN7 234 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 N4BP2L2Q92802 583 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 PPM1MQ96MI6 270 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 TEFMQ96QE5 360 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 EBF4Q9BQW3 602 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 ZPBPQ9BS86 351 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 NUF2Q9BZD4 464 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 ASPSCR1Q9BZE9 553 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 DPH1Q9BZG8 443 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 B3GNT4Q9C0J1 378 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 MID1IP1Q9NPA3 183 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 FBXO8Q9NRD0 319 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 RIC8BQ9NVN3 520 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 ZDHHC2Q9UIJ5 367 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 SNX7Q9UNH6 387 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 DYRK1BQ9Y463 629 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 K7ENP7 123 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 ZNF195O14628 629 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 STK16O75716 305 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 WDR47O94967 919 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 ESRRBO95718 433 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 ENO1P06733 434 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 MTHFD2P13995 350 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 GRIA3P42263 894 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 SLC6A12P48065 614 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 MAPK10P53779 464 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 TUBB3Q13509 450 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 IL11RAQ14626 422 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 HERC3Q15034 1050 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 ZC3H12BQ5HYM0 836 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 FIGLAQ6QHK4 219 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 CEACAM20Q6UY09 585 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 GPRIN3Q6ZVF9 776 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 THOC6Q86W42 341 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 BMPERQ8N8U9 685 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 ATP6V1E2Q96A05 226 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 PYCR2Q96C36 320 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 SLC46A1Q96NT5 459 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 TAAR9Q96RI9 348 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 ZNF382Q96SR6 550 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 BTBD10Q9BSF8 475 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 DPH7Q9BTV6 452 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 MEAF6Q9HAF1 191 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 DNAJC11Q9NVH1 559 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 SLC39A1Q9NY26 324 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 OPTCQ9UBM4 332 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 PTBP2Q9UKA9 531 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 PCDHGA3Q9Y5H0 932 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 KCNE2Q9Y6J6 123 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 COL6A6A6NMZ7 2263 aa12.91□□□□□ -0.34
CSNK1D-220ENST00000581737 OR2A25A4D2G3 310 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 ANKRD65E5RJM6 399 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 E9PBE3 544 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 POLR1CO15160 346 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 KLHL41O60662 606 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 SKAP2O75563 359 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 TNFSF15O95150 251 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 CBX6O95503 412 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 EBLN1P0CF75 366 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 UROSP10746 265 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 CCL4P13236 92 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 HGFP14210 728 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 PCSK2P16519 638 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 GNAZP19086 355 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 ARRB2P32121 409 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 GRK3P35626 688 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 ARL1P40616 181 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 KCNC1P48547 511 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 ATP4BP51164 291 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 RELAQ04206 551 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 FOXM1Q08050 763 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 NFATC3Q12968 1075 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 SRSF6Q13247 344 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 CLN3Q13286 438 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 SQLEQ14534 574 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 LINC00303Q3SY05 128 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 DCAF12Q5T6F0 453 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 KANK2Q63ZY3 851 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 ZNF425Q6IV72 752 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 ASRGL1Q7L266 308 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 ADCK2Q7Z695 626 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 C10orf67Q8IYJ2 551 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 TEX9Q8N6V9 391 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms