RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 NLNQ9BYT8 704 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 LRTM1Q9HBL6 345 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 C1orf109Q9NX04 203 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 TMED5Q9Y3A6 229 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 IGHV5-10-1A0A0J9YXX1 117 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 URADA6NGE7 173 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 H0YGG7 62 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 ZSCAN9O15535 394 aaPredicted RBP10.26□□□□□ -0.77
SS18-213ENST00000579640 NDUFS4O43181 175 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 TGFB1P01137 390 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 ACPPP15309 386 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 ARF3P61204 181 aaPredicted RBP10.26□□□□□ -0.77
SS18-213ENST00000579640 ERVK-8P63133 956 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 EMX2Q04743 252 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 TGM3Q08188 693 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 TUBB3Q13509 450 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 TERF2Q15554 542 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 TRIP6Q15654 476 aaKnown RBP10.26□□□□□ -0.77
SS18-213ENST00000579640 AP5B1Q2VPB7 878 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 ADPRMQ3LIE5 342 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 SPIN4Q56A73 249 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 TCTE1Q5JU00 501 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 SPDYAQ5MJ70 313 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 C6orf136Q5SQH8 315 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 KHDRBS2Q5VWX1 349 aaKnown RBP10.26□□□□□ -0.77
SS18-213ENST00000579640 MCATQ8IVS2 390 aaKnown RBP10.26□□□□□ -0.77
SS18-213ENST00000579640 SLITRK4Q8IW52 837 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 TMEM74Q96NL1 305 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 FAM60AQ9NP50 221 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 ENAMQ9NRM1 1142 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 SIRT5Q9NXA8 310 aa10.26□□□□□ -0.77
SS18-213ENST00000579640 MDC1Q14676 2089 aaKnown RBP10.26□□□□□ -0.77
SS18-213ENST00000579640 VPS13AQ96RL7 3174 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 FAM186AA6NE01 2351 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 LRIT2A6NDA9 550 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 TMX2-CTNND1H3BSU7 103 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 PRAMEF10O60809 474 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 CCDC22O60826 627 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 PEX11AO75192 247 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 SEC22BO75396 215 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 DCTN3O75935 186 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 MYO1DO94832 1006 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 TBX6O95947 436 aaPredicted RBP10.25□□□□□ -0.77
SS18-213ENST00000579640 SERPIND1P05546 499 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 CSRP1P21291 193 aaKnown RBP10.25□□□□□ -0.77
SS18-213ENST00000579640 MAPK1P28482 360 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 GABRA4P48169 554 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 SEPHS1P49903 392 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 ACSM2AQ08AH3 577 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 GALNTL6Q49A17 601 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 ACSM2BQ68CK6 577 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 CYB5D1Q6P9G0 228 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 RBM44Q6ZP01 1051 aaKnown RBP10.25□□□□□ -0.77
SS18-213ENST00000579640 TMPRSS9Q7Z410 1059 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 RNF175Q8N4F7 328 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 CSNK1A1LQ8N752 337 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 FNDC5Q8NAU1 212 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 N4BP2L2Q92802 583 aaPredicted RBP10.25□□□□□ -0.77
SS18-213ENST00000579640 RGMAQ96B86 450 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 CCDC74BQ96LY2 380 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 ZNF285Q96NJ3 590 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 FCRL4Q96PJ5 515 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 SLC6A16Q9GZN6 736 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 REXO4Q9GZR2 422 aaKnown RBP10.25□□□□□ -0.77
SS18-213ENST00000579640 OR51B5Q9H339 312 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 FANCEQ9HB96 536 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 ASIC5Q9NY37 505 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 HEY2Q9UBP5 337 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 EIF3LQ9Y262 564 aaKnown RBP10.25□□□□□ -0.77
SS18-213ENST00000579640 RUVBL1Q9Y265 456 aaKnown RBP10.25□□□□□ -0.77
SS18-213ENST00000579640 LAMA1P25391 3075 aa10.25□□□□□ -0.77
SS18-213ENST00000579640 DNAH14Q0VDD8 3507 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 LOC105369274A0A096LPK9 316 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 LOC102723532A0A0G2JNH3 316 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 A8MU76 341 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 E9PBE3 544 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 UBDO15205 165 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 KLHL41O60662 606 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 ETHE1O95571 254 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 CCKBRP32239 447 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 TSFMP43897 325 aaKnown RBP10.24□□□□□ -0.77
SS18-213ENST00000579640 RAP1GDS1P52306 607 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 VSX2P58304 361 aaPredicted RBP10.24□□□□□ -0.77
SS18-213ENST00000579640 RPL38P63173 70 aaKnown RBP10.24□□□□□ -0.77
SS18-213ENST00000579640 ACY1Q03154 408 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 ZFP36L1Q07352 338 aaKnown RBP10.24□□□□□ -0.77
SS18-213ENST00000579640 TBL3Q12788 808 aaKnown RBP10.24□□□□□ -0.77
SS18-213ENST00000579640 HYAL2Q12891 473 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 GSTA3Q16772 222 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 TOR1AIP1Q5JTV8 583 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 FRMPD2BQ6IN97 320 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 GALNT18Q6P9A2 607 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 PAGE2Q7Z2X7 111 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 FAM9CQ8IZT9 166 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 OR4N4Q8N0Y3 316 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 METTL4Q8N3J2 472 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 OR2L5Q8NG80 312 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 CHTF18Q8WVB6 975 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 GAL3ST3Q96A11 431 aa10.24□□□□□ -0.77
SS18-213ENST00000579640 FCRL1Q96LA6 429 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms