RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ATE1O95260 518 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 MATN4O95460 622 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 LY6G6DO95868 133 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 ERGP11308 486 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 TTPAP49638 278 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 PPIAP62937 165 aaKnown RBP15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 ABATP80404 500 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 CDH17Q12864 832 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 TYSND1Q2T9J0 566 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 THEMIS2Q5TEJ8 643 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 MEI1Q5TIA1 1274 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 VN1R4Q7Z5H5 301 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 PCGF5Q86SE9 256 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 LUZP1Q86V48 1076 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 PDSS2Q86YH6 399 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 CYP4Z2PQ8N1L4 340 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 TMEM156Q8N614 296 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 DEFB126Q9BYW3 111 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 P2RY12Q9H244 342 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 DMRT3Q9NQL9 472 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 LANCL2Q9NS86 450 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 FIGNL2A6NMB9 653 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 MYO1CO00159 1063 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 SMAPO00193 183 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 CD3EAPO15446 510 aaKnown RBP15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 NDUFS3O75489 264 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 ADRA1DP25100 572 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 ADH7P40394 386 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 EIF3BP55884 814 aaKnown RBP15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 MPP1Q00013 466 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 PLGLB1Q02325 96 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 ACVR1Q04771 509 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 ARHGAP19Q14CB8 494 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 P3H1Q32P28 736 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 SLC25A35Q3KQZ1 300 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 TMEM214Q6NUQ4 689 aaKnown RBP15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 KCT2Q8NC54 265 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 OR5T3Q8NGG3 340 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 ATG10Q9H0Y0 220 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 NEUROD4Q9HD90 331 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 ALKBH4Q9NXW9 302 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 INTUQ9ULD6 942 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 EFR3BQ9Y2G0 817 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 NAALAD2Q9Y3Q0 740 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 FAM215AQ9Y5M1 114 aa15.2■□□□□ 0.02
CTDNEP1-211ENST00000575783 ZNF839A8K0R7 811 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 FAM171A2A8MVW0 826 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 B4GALT2O60909 372 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 SLC16A8O95907 504 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 SYF2O95926 243 aaKnown RBP15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 HSD17B2P37059 387 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 GRIA1P42261 906 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 RTL6Q6ICC9 239 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 AADACL2Q6P093 401 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 PPP1R21Q6ZMI0 780 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 CREB3L4Q8TEY5 395 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 ZNF480Q8WV37 535 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 SLCO2A1Q92959 643 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 SMC6Q96SB8 1091 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 FAM114A2Q9NRY5 505 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 RIMKLBQ9ULI2 386 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 CBLCQ9ULV8 474 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
CTDNEP1-211ENST00000575783 A8MUA0 341 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 E7ENX8 843 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 BCKDKO14874 412 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 ZNF189O75820 626 aaPredicted RBP15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 TJP3O95049 919 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 FHP07954 510 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 IL10P22301 178 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 FMO4P31512 558 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 GDF10P55107 478 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 RPS15AP62244 130 aaKnown RBP15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 NKX6-1P78426 367 aaPredicted RBP15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 TAP2Q03519 686 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 FLYWCH1Q4VC44 716 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 CTSL3PQ5NE16 218 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 LRRC6Q86X45 466 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 CAMKVQ8NCB2 501 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 FAM222BQ8WU58 562 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 TBC1D20Q96BZ9 403 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 PTCHD1Q96NR3 888 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 OR1F2PQ96R84 312 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 TIMMDC1Q9NPL8 285 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 DEPPQ9NTK1 212 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 KCMF1Q9P0J7 381 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 ACAD8Q9UKU7 415 aa15.18■□□□□ 0.02
CTDNEP1-211ENST00000575783 KCNE1BA0A087WTH5 132 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 FEZF1A0PJY2 475 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 PINLYPA6NC86 204 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 SYT5O00445 386 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 KIF5CO60282 957 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 DNAJB6O75190 326 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 NIPSNAP2O75323 286 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 PSIP1O75475 530 aaKnown RBP15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 CATP04040 527 aaKnown RBP15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 TUBB4AP04350 444 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 PTMAP06454 111 aaKnown RBP15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 CHRM3P20309 590 aa15.17■□□□□ 0.02
CTDNEP1-211ENST00000575783 RPS3P23396 243 aaKnown RBP eCLIP15.17■□□□□ 0.025e-9■■■■■ 27.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms