RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 HEMGNQ9BXL5 484 aa9.73□□□□□ -0.85
CTDNEP1-202ENST00000570380 UTP6Q9NYH9 597 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-202ENST00000570380 B4GALT7Q9UBV7 327 aa9.73□□□□□ -0.85
CTDNEP1-202ENST00000570380 SLC2A6Q9UGQ3 507 aa9.73□□□□□ -0.85
CTDNEP1-202ENST00000570380 CAPN11Q9UMQ6 739 aa9.73□□□□□ -0.85
CTDNEP1-202ENST00000570380 HEATR5AQ86XA9 2040 aa9.73□□□□□ -0.85
CTDNEP1-202ENST00000570380 DSCAMO60469 2012 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 A0A1B0GVC2 190 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 TUBAL3A6NHL2 446 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 SPOPO43791 374 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 WDR1O75083 606 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 CRLF1O75462 422 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 IGHG3P01860 377 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 TUBB4AP04350 444 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 ASTE1Q2TB18 679 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 FBXL19-AS1Q494R0 122 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 RIPPLY2Q5TAB7 128 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 TMEM214Q6NUQ4 689 aaKnown RBP9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 C16orf47Q6ZP98 133 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 TRILQ7L0X0 811 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 ADCK2Q7Z695 626 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 P3H2Q8IVL5 708 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 RCOR2Q8IZ40 523 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 TMEM156Q8N614 296 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 PPFIBP2Q8ND30 876 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 NFAM1Q8NET5 270 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 OR4L1Q8NH43 312 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 ACTL9Q8TC94 416 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 LRRC45Q96CN5 670 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 FOPNLQ96NB1 174 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 PPP1R2P1Q96PQ5 205 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 FAM118BQ9BPY3 351 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 FERMT1Q9BQL6 677 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 BDH2Q9BUT1 245 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 CNPPD1Q9BV87 410 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 DEFB126Q9BYW3 111 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 KCMF1Q9P0J7 381 aa9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 TSR3Q9UJK0 312 aaKnown RBP9.72□□□□□ -0.85
CTDNEP1-202ENST00000570380 A0A0G2JMM0 328 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 A0A1W2PPB8 328 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 A0A1W2PRS3 328 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 TRIM64A6NGJ6 449 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF860A6NHJ4 632 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 TRIM64BA6NI03 449 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 SAGE2PA6NJ88 616 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 CLCA1A8K7I4 914 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 KIR3DP1A8MWS1 328 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 H7BY64 318 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 PRMT5O14744 637 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 PSTPIP1O43586 416 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 DNAJB6O75190 326 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ITGA10O75578 1167 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 GLSO94925 669 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 CCNDBP1O95273 360 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 MATN4O95460 622 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 METTL18O95568 372 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 RBP3P10745 1247 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 MARCKSL1P49006 195 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ASCL1P50553 236 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 PLGLB1Q02325 96 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 POU4F3Q15319 338 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ANKRD20A4Q4UJ75 823 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 FASTKD1Q53R41 847 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 PTRHD1Q6GMV3 140 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 AFTPHQ6ULP2 937 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 RGS9BPQ6ZS82 235 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 CAPN12Q6ZSI9 719 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 KIAA0408Q6ZU52 694 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 SEM1Q6ZVN7 128 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 OTOAQ7RTW8 1153 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 CDKL3Q8IVW4 592 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 RHOT2Q8IXI1 618 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 KATNAL2Q8IYT4 538 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 CYP4X1Q8N118 509 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 LRRC75A-AS1Q8N1F1 130 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 KCT2Q8NC54 265 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 PSD4Q8NDX1 1056 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 OR2M7Q8NG81 312 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 OR5T3Q8NGG3 340 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 OR6P1Q8NGX9 317 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 LINC01560Q8TB33 94 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZCCHC10Q8TBK6 192 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF592Q92610 1267 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF778Q96MU6 729 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 PRAP1Q96NZ9 151 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 OR1F2PQ96R84 312 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 TTTY12Q9BZ98 90 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 LRRC40Q9H9A6 602 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ANKHQ9HCJ1 492 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ABCF3Q9NUQ8 709 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ALKBH4Q9NXW9 302 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 ACAD8Q9UKU7 415 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 NAALAD2Q9Y3Q0 740 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 DOCK7Q96N67 2140 aa9.71□□□□□ -0.86
CTDNEP1-202ENST00000570380 NINQ8N4C6 2090 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 KCNE1BA0A087WTH5 132 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 FAM47E-STBD1D6RA91 191 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 ACOT7O00154 380 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 MYO1CO00159 1063 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms