RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GLDCP23378 1020 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PCBP4P57723 403 aaKnown RBP6.43□□□□□ -1.38
SMG1-217ENST00000569764 SNTA1Q13424 505 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PARP15Q460N3 678 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PSAPL1Q6NUJ1 521 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 BRAT1Q6PJG6 821 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 TIPARPQ7Z3E1 657 aaKnown RBP6.43□□□□□ -1.38
SMG1-217ENST00000569764 SPATA19Q7Z5L4 167 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 LUZP2Q86TE4 346 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PRUNE1Q86TP1 453 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 ZNF573Q86YE8 665 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 ELMOD2Q8IZ81 293 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 MCOLN2Q8IZK6 566 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 KLHL36Q8N4N3 616 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 CISD2Q8N5K1 135 aaKnown RBP6.43□□□□□ -1.38
SMG1-217ENST00000569764 ACTRT1Q8TDG2 376 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PCED1BQ96HM7 432 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 CCDC3Q9BQI4 270 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 OCSTAMPQ9BR26 566 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 COPS4Q9BT78 406 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 DHX35Q9H5Z1 703 aaKnown RBP6.43□□□□□ -1.38
SMG1-217ENST00000569764 OCEL1Q9H607 264 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 WDR55Q9H6Y2 383 aaPredicted RBP6.43□□□□□ -1.38
SMG1-217ENST00000569764 FAM212BQ9NTI7 297 aaPredicted RBP6.43□□□□□ -1.38
SMG1-217ENST00000569764 TMEM160Q9NX00 188 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 MARCH5Q9NX47 278 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 GPSM3Q9Y4H4 160 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PCDHA3Q9Y5H8 950 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PIPSLA2A3N6 862 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 ANXA9O76027 345 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 CDK14O94921 469 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 KRT8P05787 483 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 TACR2P21452 398 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 CASRP41180 1078 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 EPHA5P54756 1037 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 BDH1Q02338 343 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PDCD1Q15116 288 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 PHF19Q5T6S3 580 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 HMBOX1Q6NT76 420 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 ALLCQ8N6M5 410 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 CLDN23Q96B33 292 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 TAMM41Q96BW9 452 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 TOE1Q96GM8 510 aaKnown RBP6.43□□□□□ -1.38
SMG1-217ENST00000569764 ELMO2Q96JJ3 720 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 DPEP2Q9H4A9 486 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 SMYD3Q9H7B4 428 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 STMN3Q9NZ72 180 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 COLEC10Q9Y6Z7 277 aa6.43□□□□□ -1.38
SMG1-217ENST00000569764 MEIS3P2A8K0S8 358 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 H3BML4 177 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 MKRN2OSH3BPM6 223 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 CTDSP2O14595 271 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ABCD4O14678 606 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 EIF3HO15372 352 aaKnown RBP eCLIP6.42□□□□□ -1.387e-8■■■□□ 19.1
SMG1-217ENST00000569764 DUX1O43812 170 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 GABBR2O75899 941 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 LDLRP01130 860 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 GGCXP38435 758 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 MDH1P40925 334 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 SMSP52788 366 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 FOXM1Q08050 763 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 PRSS53Q2L4Q9 553 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 HPS6Q86YV9 775 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 TREML1Q86YW5 311 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 KATNAL2Q8IYT4 538 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 PRELID2Q8N945 189 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 OR5T1Q8NG75 326 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 NANPQ8TBE9 248 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 LMX1AQ8TE12 382 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 PTPRN2Q92932 1015 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 SAT2Q96F10 170 aaPredicted RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 PIWIL1Q96J94 861 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 C11orf70Q9BRQ4 267 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 NAA11Q9BSU3 229 aaPredicted RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 PNPOQ9NVS9 261 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 KLHL3Q9UH77 587 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 RUVBL2Q9Y230 463 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 STX7O15400 261 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 PRAMEF2O60811 474 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ADAM11O75078 769 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ATP2C2O75185 946 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ELFN1P0C7U0 828 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 GOT1P17174 413 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 CEBPDP49716 269 aaPredicted RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 TAS2R50P59544 299 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 REEP5Q00765 189 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 MTAPQ13126 283 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 C3orf33Q6P1S2 294 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ZNF605Q86T29 641 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 UBQLNLQ8IYU4 475 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 RTL3Q8N8U3 475 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 GLIS1Q8NBF1 620 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ZNF564Q8TBZ8 553 aaPredicted RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 PROX1Q92786 737 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 C16orf58Q96GQ5 468 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 S1PR5Q9H228 398 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ZDHHC6Q9H6R6 413 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ARL8BQ9NVJ2 186 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 AHSPQ9NZD4 102 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms