RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 URADA6NGE7 173 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 JRKO75564 520 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 GP5P40197 560 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 SCTRP47872 440 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 SNRPNP63162 240 aaKnown RBP17.73■□□□□ 0.43
IFT140-208ENST00000566818 CKAP4Q07065 602 aaKnown RBP17.73■□□□□ 0.43
IFT140-208ENST00000566818 MRPL49Q13405 166 aaKnown RBP17.73■□□□□ 0.43
IFT140-208ENST00000566818 USP10Q14694 798 aaKnown RBP17.73■□□□□ 0.43
IFT140-208ENST00000566818 TSNQ15631 228 aaKnown RBP17.73■□□□□ 0.43
IFT140-208ENST00000566818 CPEB2Q7Z5Q1 589 aaKnown RBP17.73■□□□□ 0.43
IFT140-208ENST00000566818 PDSS2Q86YH6 399 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 CEP97Q8IW35 865 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 SIRT6Q8N6T7 355 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 TRPV3Q8NET8 790 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 ANKRD49Q8WVL7 239 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 CYTH2Q99418 400 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 SMYD2Q9NRG4 433 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 TEKT2Q9UIF3 430 aa17.73■□□□□ 0.43
IFT140-208ENST00000566818 TCRBV9S1A1TA0A576 114 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 STMN1P16949 149 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 ALOX12P18054 663 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 PLTPP55058 493 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 NXPE4Q6UWF7 544 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 CYS1Q717R9 158 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 CCDC25Q86WR0 208 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 C17orf53Q8N3J3 647 aaPredicted RBP17.72■□□□□ 0.43
IFT140-208ENST00000566818 TCAIMQ8N3R3 496 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 AFAP1L2Q8N4X5 818 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 ZNF740Q8NDX6 193 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 GPR22Q99680 433 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 RBBP8Q99708 897 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 LRRC4CQ9HCJ2 640 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 SLC22A14Q9Y267 594 aa17.72■□□□□ 0.43
IFT140-208ENST00000566818 MTO1Q9Y2Z2 717 aaKnown RBP17.72■□□□□ 0.43
IFT140-208ENST00000566818 BLACEA4D250 179 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 ZNF860A6NHJ4 632 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 FAM159BA6NKW6 160 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 GALR3O60755 368 aaPredicted RBP17.71■□□□□ 0.43
IFT140-208ENST00000566818 PIAS1O75925 651 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 SEC24DO94855 1032 aaPredicted RBP17.71■□□□□ 0.43
IFT140-208ENST00000566818 WDR47O94967 919 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 ZNF888P0CJ79 500 aaPredicted RBP17.71■□□□□ 0.43
IFT140-208ENST00000566818 GNAZP19086 355 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 JAK1P23458 1154 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 STX2P32856 288 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 ATP6V0D1P61421 351 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 RBBP5Q15291 538 aaKnown RBP17.71■□□□□ 0.43
IFT140-208ENST00000566818 DEFB134Q4QY38 66 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 C3orf62Q6ZUJ4 267 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 LANCL3Q6ZV70 420 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 ANKRD37Q7Z713 158 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 CTAGE3PQ8IX95 158 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 KLHDC8AQ8IYD2 350 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 PRR7Q8TB68 274 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 PEX11GQ96HA9 241 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 IMMP1LQ96LU5 166 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 RBCK1Q9BYM8 510 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 SPNS1Q9H2V7 528 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 CNOT10Q9H9A5 744 aaKnown RBP17.71■□□□□ 0.43
IFT140-208ENST00000566818 CAB39LQ9H9S4 337 aa17.71■□□□□ 0.43
IFT140-208ENST00000566818 USP9XQ93008 2570 aaPredicted RBP17.71■□□□□ 0.43
IFT140-208ENST00000566818 COL12A1Q99715 3063 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 TRAV17A0A0B4J275 112 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 ANKUB1A6NFN9 424 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 CXorf49A8MYA2 514 aaPredicted RBP17.7■□□□□ 0.42
IFT140-208ENST00000566818 H2AFYO75367 372 aaKnown RBP17.7■□□□□ 0.42
IFT140-208ENST00000566818 CELA2AP08217 269 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 CCDC166P0CW27 439 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 ITGAMP11215 1152 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 GP1BBP13224 206 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 SPRP35270 261 aaPredicted RBP17.7■□□□□ 0.42
IFT140-208ENST00000566818 SLC6A12P48065 614 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 EFNA3P52797 238 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 ESPL1Q14674 2120 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 ABRAXAS2Q15018 415 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 TGFBIQ15582 683 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 INAQ16352 499 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 EXT1Q16394 746 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 EIF2S3LQ2VIR3 472 aaKnown RBP17.7■□□□□ 0.42
IFT140-208ENST00000566818 BTBD16Q32M84 506 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 ABHD17BQ5VST6 288 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 PLAG1Q6DJT9 500 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 RPUSD3Q6P087 351 aaKnown RBP17.7■□□□□ 0.42
IFT140-208ENST00000566818 FAM180AQ6UWF9 173 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 ZNF572Q7Z3I7 529 aaPredicted RBP17.7■□□□□ 0.42
IFT140-208ENST00000566818 TTLQ8NG68 377 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 FBXO25Q8TCJ0 367 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 SSC4DQ8WTU2 575 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 PSMF1Q92530 271 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 TBC1D20Q96BZ9 403 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 RHBDF1Q96CC6 855 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 MOCOSQ96EN8 888 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 BARD1Q99728 777 aaKnown RBP17.7■□□□□ 0.42
IFT140-208ENST00000566818 CAPS2Q9BXY5 557 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 RNF32Q9H0A6 362 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 CLK4Q9HAZ1 481 aaKnown RBP17.7■□□□□ 0.42
IFT140-208ENST00000566818 WWOXQ9NZC7 414 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 NTNG1Q9Y2I2 539 aa17.7■□□□□ 0.42
IFT140-208ENST00000566818 NCF1BA6NI72 391 aaPredicted RBP17.69■□□□□ 0.42
IFT140-208ENST00000566818 NCF1CA8MVU1 366 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms